miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45567_miR166:micropc
Length = 194
Score = 188 bits (95), Expect = 1e-48
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 100 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 159
Query: 160 tcttgatctggtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||||||||||||
Sbjct: 160 tcttgatctggtgtcgtcggaccaggcttcattcc 194
Score = 139 bits (70), Expect = 9e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 gggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggatct 60
Query: 61 cttttctctc 70
||||||||||
Sbjct: 61 cttttctctc 70
>45509_miR166:micropc
Length = 199
Score = 188 bits (95), Expect = 1e-48
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 100 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 162
Query: 160 tcttgatctggtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||||||||||||
Sbjct: 163 tcttgatctggtgtcgtcggaccaggcttcattcc 197
Score = 139 bits (70), Expect = 9e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 gggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggatct 63
Query: 61 cttttctctc 70
||||||||||
Sbjct: 64 cttttctctc 73
>45363_miR166:micropc
Length = 197
Score = 188 bits (95), Expect = 1e-48
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 100 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 161
Query: 160 tcttgatctggtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||||||||||||
Sbjct: 162 tcttgatctggtgtcgtcggaccaggcttcattcc 196
Score = 139 bits (70), Expect = 9e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 gggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggatct 62
Query: 61 cttttctctc 70
||||||||||
Sbjct: 63 cttttctctc 72
>45116_miR166:micropc
Length = 197
Score = 188 bits (95), Expect = 1e-48
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 100 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 161
Query: 160 tcttgatctggtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||||||||||||
Sbjct: 162 tcttgatctggtgtcgtcggaccaggcttcattcc 196
Score = 139 bits (70), Expect = 9e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 gggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggatct 62
Query: 61 cttttctctc 70
||||||||||
Sbjct: 63 cttttctctc 72
>46741_miR166:micropc
Length = 151
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 170 gtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||
Sbjct: 126 gtgtcgtcggaccaggcttcattcc 150
>46481_miR166:micropc
Length = 88
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 170 gtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||
Sbjct: 63 gtgtcgtcggaccaggcttcattcc 87
>46431_miR166:micropc
Length = 153
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 170 gtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||
Sbjct: 127 gtgtcgtcggaccaggcttcattcc 151
>46390_miR166:micropc
Length = 151
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 170 gtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||
Sbjct: 126 gtgtcgtcggaccaggcttcattcc 150
>46337_miR166:micropc
Length = 145
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 170 gtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||
Sbjct: 120 gtgtcgtcggaccaggcttcattcc 144
>45905_miR166:micropc
Length = 100
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 170 gtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||
Sbjct: 75 gtgtcgtcggaccaggcttcattcc 99
>45748_miR166:micropc
Length = 100
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 170 gtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||
Sbjct: 75 gtgtcgtcggaccaggcttcattcc 99
>45518_miR166:micropc
Length = 131
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 170 gtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||
Sbjct: 106 gtgtcgtcggaccaggcttcattcc 130
>45045_miR166:micropc
Length = 149
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 170 gtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||
Sbjct: 125 gtgtcgtcggaccaggcttcattcc 149
>44943_miR166:micropc
Length = 149
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 170 gtgtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||||
Sbjct: 125 gtgtcgtcggaccaggcttcattcc 149
>46784_miR166:micropc
Length = 138
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 172 gtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||
Sbjct: 115 gtcgtcggaccaggcttcattcc 137
>46335_miR166:micropc
Length = 99
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 172 gtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||
Sbjct: 76 gtcgtcggaccaggcttcattcc 98
>46273_miR166:micropc
Length = 138
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 172 gtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||
Sbjct: 115 gtcgtcggaccaggcttcattcc 137
>45764_miR166:micropc
Length = 99
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 172 gtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||
Sbjct: 76 gtcgtcggaccaggcttcattcc 98
>45017_miR166:micropc
Length = 178
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 172 gtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||
Sbjct: 155 gtcgtcggaccaggcttcattcc 177
>44979_miR166:micropc
Length = 99
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 172 gtcgtcggaccaggcttcattcc 194
|||||||||||||||||||||||
Sbjct: 76 gtcgtcggaccaggcttcattcc 98
>46070_miR166:micropc
Length = 142
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 165 atctggtgtcgtcggaccaggcttcattcc 194
|||| |||| ||||||||||||||||||||
Sbjct: 111 atcttgtgttgtcggaccaggcttcattcc 140
>45882_miR166:micropc
Length = 140
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 165 atctggtgtcgtcggaccaggcttcattcc 194
|||| |||| ||||||||||||||||||||
Sbjct: 110 atcttgtgttgtcggaccaggcttcattcc 139
>45434_miR166:micropc
Length = 138
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 165 atctggtgtcgtcggaccaggcttcattcc 194
|||| |||| ||||||||||||||||||||
Sbjct: 109 atcttgtgttgtcggaccaggcttcattcc 138
>44803_miR166:micropc
Length = 140
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 165 atctggtgtcgtcggaccaggcttcattcc 194
|||| |||| ||||||||||||||||||||
Sbjct: 110 atcttgtgttgtcggaccaggcttcattcc 139
>46788_miR166:micropc
Length = 164
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cgtcggaccaggcttcattcc 194
|||||||||||||||||||||
Sbjct: 142 cgtcggaccaggcttcattcc 162
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 4 atgttgtctggctccaggccacta 27
|||||||||||||| |||||||||
Sbjct: 6 atgttgtctggctcgaggccacta 29
>46438_miR166:micropc
Length = 74
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cgtcggaccaggcttcattcc 194
|||||||||||||||||||||
Sbjct: 54 cgtcggaccaggcttcattcc 74
>46248_miR166:micropc
Length = 76
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cgtcggaccaggcttcattcc 194
|||||||||||||||||||||
Sbjct: 55 cgtcggaccaggcttcattcc 75
>46204_miR166:micropc
Length = 76
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cgtcggaccaggcttcattcc 194
|||||||||||||||||||||
Sbjct: 55 cgtcggaccaggcttcattcc 75
>44922_miR166:micropc
Length = 78
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cgtcggaccaggcttcattcc 194
|||||||||||||||||||||
Sbjct: 56 cgtcggaccaggcttcattcc 76
>44893_miR166:micropc
Length = 162
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cgtcggaccaggcttcattcc 194
|||||||||||||||||||||
Sbjct: 141 cgtcggaccaggcttcattcc 161
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 4 atgttgtctggctccaggccacta 27
|||||||||||||| |||||||||
Sbjct: 5 atgttgtctggctcgaggccacta 28
>44795_miR166:micropc
Length = 160
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cgtcggaccaggcttcattcc 194
|||||||||||||||||||||
Sbjct: 140 cgtcggaccaggcttcattcc 160
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 4 atgttgtctggctccaggccacta 27
|||||||||||||| |||||||||
Sbjct: 4 atgttgtctggctcgaggccacta 27
>46517_miR166:micropc
Length = 75
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 gtcggaccaggcttcattcc 194
||||||||||||||||||||
Sbjct: 54 gtcggaccaggcttcattcc 73
>46444_miR166:micropc
Length = 73
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 gtcggaccaggcttcattcc 194
||||||||||||||||||||
Sbjct: 53 gtcggaccaggcttcattcc 72
>45781_miR166:micropc
Length = 117
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 gtcggaccaggcttcattcc 194
||||||||||||||||||||
Sbjct: 97 gtcggaccaggcttcattcc 116
>45037_miR166:micropc
Length = 71
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 gtcggaccaggcttcattcc 194
||||||||||||||||||||
Sbjct: 52 gtcggaccaggcttcattcc 71
>45008_miR166:micropc
Length = 73
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 gtcggaccaggcttcattcc 194
||||||||||||||||||||
Sbjct: 53 gtcggaccaggcttcattcc 72
>44945_miR166:micropc
Length = 117
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 gtcggaccaggcttcattcc 194
||||||||||||||||||||
Sbjct: 97 gtcggaccaggcttcattcc 116
