miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46158_miR482:micropc
Length = 90
Score = 178 bits (90), Expect = 5e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 3 agtggaaggatagggtaagactgcggttaagtgaggctgcttcaataattatttgctcta 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtggaaggatagggtaagactgcggttaagtgaggctgcttcaataattatttgctcta 60
Query: 63 atctcaccagtcttccctactcctcccatt 92
||||||||||||||||||||||||||||||
Sbjct: 61 atctcaccagtcttccctactcctcccatt 90
>44838_miR482:micropc
Length = 94
Score = 163 bits (82), Expect = 3e-41
Identities = 91/94 (96%)
Strand = Plus / Plus
Query: 1 ggagtggaaggatagggtaagactgcggttaagtgaggctgcttcaataattatttgctc 60
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 1 ggagtggaaggatagggtaagactgcggttaagtgagtctgcttcaataattctttgctc 60
Query: 61 taatctcaccagtcttccctactcctcccattcc 94
||||||||||||||||||||||||||||| ||||
Sbjct: 61 taatctcaccagtcttccctactcctccccttcc 94
>45114_miR482:micropc
Length = 88
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 69 ccagtcttccctactcctcccattcc 94
||||||||||||||||||||||||||
Sbjct: 63 ccagtcttccctactcctcccattcc 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 gtggaaggatagggtaagactgcggttaag 33
||||||||||||||||||||| |||||||
Sbjct: 4 gtggaaggatagggtaagactagggttaag 33
>45999_miR482:micropc
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 69 ccagtcttccctactcctcccatt 92
||||||||||||||||||||||||
Sbjct: 59 ccagtcttccctactcctcccatt 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 5 tggaaggatagggtaagactgcggttaag 33
|||||||||||||||||||| |||||||
Sbjct: 1 tggaaggatagggtaagactaaggttaag 29
>45021_miR482:micropc
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 69 ccagtcttccctactcctcccatt 92
||||||||||||||||||||||||
Sbjct: 59 ccagtcttccctactcctcccatt 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 5 tggaaggatagggtaagactgcggttaag 33
|||||||||||||||||||| |||||||
Sbjct: 1 tggaaggatagggtaagactagggttaag 29
>46356_miR482:micropc
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 gtggaaggatagggtaagactgcggttaag 33
||||||||||||||||||||| |||||||
Sbjct: 4 gtggaaggatagggtaagactaaggttaag 33
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 69 ccagtcttccctactcctcccattcc 94
|||||| |||||||||||||||||||
Sbjct: 63 ccagtcctccctactcctcccattcc 88
>44825_miR482:micropc
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 4 gtggaaggatagggtaagactgcggttaag 33
||||||||||||||||||||| |||||||
Sbjct: 4 gtggaaggatagggtaagactaaggttaag 33
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 69 ccagtcttccctactcctcccattcc 94
|||||| |||||||||||||||||||
Sbjct: 63 ccagtcctccctactcctcccattcc 88
>45229_miR482:micropc
Length = 66
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 70 cagtcttccctactcctcccattcc 94
||||||| |||||||||||||||||
Sbjct: 42 cagtctttcctactcctcccattcc 66
