miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46632_miR157:micropc
Length = 144
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacaccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacaccgc 63
Query: 61 aagtggatataaggaaattcaagaaagagaggaaaaaagagcctgcatctctactctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aagtggatataaggaaattcaagaaagagaggaaaaaagagcctgcatctctactctttt 123
Query: 121 gtgctctctatacttctg 138
||||||||||||||||||
Sbjct: 124 gtgctctctatacttctg 141
>46252_miR157:micropc
Length = 146
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacaccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacaccgc 64
Query: 61 aagtggatataaggaaattcaagaaagagaggaaaaaagagcctgcatctctactctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 aagtggatataaggaaattcaagaaagagaggaaaaaagagcctgcatctctactctttt 124
Query: 121 gtgctctctatacttctg 138
||||||||||||||||||
Sbjct: 125 gtgctctctatacttctg 142
>45964_miR157:micropc
Length = 145
Score = 95.6 bits (48), Expect = 8e-21
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacaccgc 60
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 1 cagaagatagagagcactaaggatgacatgcaagtacatatgtatgtatcatcacaccgc 60
>46691_miR157:micropc
Length = 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgca 32
|||||||||||| ||||||||||||| |||||
Sbjct: 4 cagaagatagagggcactaaggatgatatgca 35
>45681_miR157:micropc
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgca 32
|||||||||||| ||||||||||||| |||||
Sbjct: 5 cagaagatagagggcactaaggatgatatgca 36
>46518_miR156:micropc
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgc 31
|||||||||||||||||||| ||||| ||||
Sbjct: 1 cagaagatagagagcactaatgatgatatgc 31
>46149_miR156:micropc
Length = 83
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgc 31
|||||||||||||||||||| ||||| ||||
Sbjct: 1 cagaagatagagagcactaatgatgatatgc 31
>46100_miR157:micropc
Length = 89
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgc 31
|||||||||||||||||||| ||||| ||||
Sbjct: 4 cagaagatagagagcactaatgatgatatgc 34
>45968_miR157:micropc
Length = 90
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgc 31
|||||||||||||||||||| ||||| ||||
Sbjct: 5 cagaagatagagagcactaatgatgatatgc 35
>45009_miR157:micropc
Length = 99
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgc 31
|||||||||||||||||||| ||||| ||||
Sbjct: 5 cagaagatagagagcactaatgatgatatgc 35
>44895_miR157:micropc
Length = 98
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgc 31
|||||||||||||||||||| ||||| ||||
Sbjct: 4 cagaagatagagagcactaatgatgatatgc 34
>46821_miR157:micropc
Length = 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 33/36 (91%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 103 ctgcatctctactcttttgtgctctctatacttctg 138
||||||||| |||| |||||||||||||| ||||||
Sbjct: 47 ctgcatctc-actcctttgtgctctctatgcttctg 81
>46572_miR157:micropc
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgca 32
|||||||||||||||||| | ||||| |||||
Sbjct: 4 cagaagatagagagcactgatgatgaaatgca 35
>45538_miR157:micropc
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 33/36 (91%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 103 ctgcatctctactcttttgtgctctctatacttctg 138
||||||||| |||| |||||||||||||| ||||||
Sbjct: 48 ctgcatctc-actcctttgtgctctctatgcttctg 82
>45004_miR156:micropc
Length = 78
Score = 40.1 bits (20), Expect = 4e-04
Identities = 33/36 (91%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 103 ctgcatctctactcttttgtgctctctatacttctg 138
||||||||| |||| |||||||||||||| ||||||
Sbjct: 44 ctgcatctc-actcctttgtgctctctatgcttctg 78
>44931_miR157:micropc
Length = 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgca 32
|||||||||||||||||| | ||||| |||||
Sbjct: 5 cagaagatagagagcactgatgatgaaatgca 36
>44856_miR156:micropc
Length = 77
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcactaaggatgacatgca 32
|||||||||||||||||| | ||||| |||||
Sbjct: 1 cagaagatagagagcactgatgatgaaatgca 32
