miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46680_miR399:micropc
Length = 96
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 agggaaactcaacgttggcaaggaaactataatcagtgagacaatattattgctcacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agggaaactcaacgttggcaaggaaactataatcagtgagacaatattattgctcacaag 60
Query: 61 attgaggttgagtctttgccaaaggagagttgccct 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgaggttgagtctttgccaaaggagagttgccct 96
>44788_miR399:micropc
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 2 gggaaactcaacgttggcaaggaaactataatcagtgagacaatattattgctcacaaga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggaaactcaacgttggcaaggaaactataatcagtgagacaatattattgctcacaaga 60
Query: 62 ttgaggttgagtctttgccaaaggagagttgccc 95
||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgaggttgagtctttgccaaaggagagttgccc 94
>46506_miR399:micropc
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tttgccaaaggagagttgccct 96
||||||||||||||||||||||
Sbjct: 86 tttgccaaaggagagttgccct 107
>44965_miR399:micropc
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tttgccaaaggagagttgccct 96
||||||||||||||||||||||
Sbjct: 86 tttgccaaaggagagttgccct 107
>46805_miR399:micropc
Length = 74
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 ttgccaaaggagagttgccct 96
|||||||||||||||||||||
Sbjct: 53 ttgccaaaggagagttgccct 73
>46622_miR399:micropc
Length = 72
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 ttgccaaaggagagttgccct 96
|||||||||||||||||||||
Sbjct: 52 ttgccaaaggagagttgccct 72
>46480_miR399:micropc
Length = 102
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 ttgccaaaggagagttgccct 96
|||||||||||||||||||||
Sbjct: 82 ttgccaaaggagagttgccct 102
>46373_miR399:micropc
Length = 74
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 ttgccaaaggagagttgccct 96
|||||||||||||||||||||
Sbjct: 53 ttgccaaaggagagttgccct 73
>46085_miR399:micropc
Length = 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 tttgccaaaggagagttgccc 95
|||||||||||||||||||||
Sbjct: 84 tttgccaaaggagagttgccc 104
>45691_miR399:micropc
Length = 71
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 ttgccaaaggagagttgccct 96
|||||||||||||||||||||
Sbjct: 51 ttgccaaaggagagttgccct 71
>45227_miR399:micropc
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 ttgccaaaggagagttgccct 96
|||||||||||||||||||||
Sbjct: 52 ttgccaaaggagagttgccct 72
>45225_miR399:micropc
Length = 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 tttgccaaaggagagttgccc 95
|||||||||||||||||||||
Sbjct: 84 tttgccaaaggagagttgccc 104
>45222_miR399:micropc
Length = 102
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 ttgccaaaggagagttgccct 96
|||||||||||||||||||||
Sbjct: 82 ttgccaaaggagagttgccct 102
>44886_miR399:micropc
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 ttgccaaaggagagttgccct 96
|||||||||||||||||||||
Sbjct: 52 ttgccaaaggagagttgccct 72
>46374_miR399:micropc
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgccaaaggagagttgccct 96
||||||||||||||||||||
Sbjct: 68 tgccaaaggagagttgccct 87
>46147_miR399:micropc
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 ttgccaaaggagagttgccc 95
||||||||||||||||||||
Sbjct: 51 ttgccaaaggagagttgccc 70
>46063_miR399:micropc
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 ttgccaaaggagagttgccc 95
||||||||||||||||||||
Sbjct: 81 ttgccaaaggagagttgccc 100
>46005_miR399:micropc
Length = 69
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 ttgccaaaggagagttgccc 95
||||||||||||||||||||
Sbjct: 50 ttgccaaaggagagttgccc 69
>45043_miR399:micropc
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgccaaaggagagttgccct 96
||||||||||||||||||||
Sbjct: 68 tgccaaaggagagttgccct 87
