miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46045_miR169:micropc
Length = 92
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtcttcttcctccctcagatgcctaattagccttggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgcctatgtcttcttcctccctcagatgcctaattagccttggagg 61
Query: 61 tgtggggtctcatgggcagtcaccttggct 90
||||||||||||||||||||||||||||||
Sbjct: 62 tgtggggtctcatgggcagtcaccttggct 91
>45660_miR169:micropc
Length = 90
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtcttcttcctccctcagatgcctaattagccttggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgcctatgtcttcttcctccctcagatgcctaattagccttggagg 60
Query: 61 tgtggggtctcatgggcagtcaccttggct 90
||||||||||||||||||||||||||||||
Sbjct: 61 tgtggggtctcatgggcagtcaccttggct 90
>45214_miR169:micropc
Length = 92
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtcttcttcctccctcagatgcctaattagccttggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgcctatgtcttcttcctccctcagatgcctaattagccttggagg 61
Query: 61 tgtggggtctcatgggcagtcaccttggct 90
||||||||||||||||||||||||||||||
Sbjct: 62 tgtggggtctcatgggcagtcaccttggct 91
>45073_miR169:micropc
Length = 92
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtcttcttcctccctcagatgcctaattagccttggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgcctatgtcttcttcctccctcagatgcctaattagccttggagg 61
Query: 61 tgtggggtctcatgggcagtcaccttggct 90
||||||||||||||||||||||||||||||
Sbjct: 62 tgtggggtctcatgggcagtcaccttggct 91
>46840_miR169:micropc
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctat 21
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgcctat 21
>46786_miR169:micropc
Length = 93
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtcttctt 29
||||||||||||||||||| | |||||||
Sbjct: 1 agccaaggatgacttgcctgtttcttctt 29
>46425_miR169:micropc
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctat 21
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgcctat 21
>46272_miR169:micropc
Length = 110
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtcttctt 29
||||||||||||||||||| || ||||||
Sbjct: 1 agccaaggatgacttgcctgtggcttctt 29
>46188_miR169:micropc
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctat 21
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgcctat 22
>46115_miR169:micropc
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctat 21
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgcctat 21
>45883_miR169:micropc
Length = 93
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtcttctt 29
||||||||||||||||||| | |||||||
Sbjct: 1 agccaaggatgacttgcctgtttcttctt 29
>45864_miR169:micropc
Length = 99
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 66 ggtctcatgggcagtcaccttggct 90
|||||||||||||||| ||||||||
Sbjct: 73 ggtctcatgggcagtccccttggct 97
>45807_miR169:micropc
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctat 21
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgcctat 22
>45750_miR169:micropc
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtcttctt 29
||||||||||||||||||| | |||||||
Sbjct: 2 agccaaggatgacttgcctgtttcttctt 30
>45721_miR169:micropc
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctat 21
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgcctat 22
>45637_miR169:micropc
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctat 21
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgcctat 22
>45620_miR169:micropc
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctat 21
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgcctat 21
>45536_miR169:micropc
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctat 21
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgcctat 21
>45185_miR169:micropc
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctat 21
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgcctat 22
>45139_miR169:micropc
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtcttctt 29
||||||||||||||||||| | |||||||
Sbjct: 2 agccaaggatgacttgcctgtttcttctt 30
>45098_miR169:micropc
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctat 21
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgcctat 22
>44981_miR169:micropc
Length = 110
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtcttctt 29
||||||||||||||||||| || ||||||
Sbjct: 1 agccaaggatgacttgcctgtggcttctt 29
>44953_miR169:micropc
Length = 89
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctat 21
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgcctat 22
>44871_miR169:micropc
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctat 21
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgcctat 22
>44858_miR169:micropc
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtcttctt 29
||||||||||||||||||| | |||||||
Sbjct: 2 agccaaggatgacttgcctgtttcttctt 30
>46841_miR169:micropc
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
>46764_miR169:micropc
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccta 20
>46648_miR169:micropc
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
>46644_miR169:micropc
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
>46535_miR169:micropc
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 1 agccaaggatgacttgcctgtgtc 24
>46516_miR169:micropc
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
>46508_miR169:micropc
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
>46458_miR169:micropc
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
>46421_miR169:micropc
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
>46201_miR169:micropc
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
>46161_miR169:micropc
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
>46089_miR169:micropc
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 1 agccaaggatgacttgcctgtgtc 24
>46071_miR169:micropc
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
>46056_miR169:micropc
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccta 20
>45996_miR169:micropc
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccta 20
>45953_miR169:micropc
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 1 agccaaggatgacttgcctgtgtc 24
>45874_miR169:micropc
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
>45787_miR169:micropc
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 1 agccaaggatgacttgcctgtgtc 24
>45654_miR169:micropc
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
>45651_miR169:micropc
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
>45629_miR169:micropc
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccta 20
>45589_miR169:micropc
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccta 20
>45529_miR169:micropc
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
>45441_miR169:micropc
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccta 20
>45373_miR169:micropc
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 1 agccaaggatgacttgcctgtgtc 24
>45358_miR169:micropc
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
>45193_miR169:micropc
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
>44888_miR169:micropc
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 1 agccaaggatgacttgcctgtgtc 24
>44887_miR169:micropc
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
>44883_miR169:micropc
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
>44839_miR169:micropc
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccta 21
>44784_miR169:micropc
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatgtc 24
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtgtc 25
