miRNEST 2.0, an integrative microRNA resource :: BLAST
>44920_miR162:micropc
Length = 85
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatctcttcctgaatttggctgtggaagaacacaaagcaaga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctgaatttggctgtggaagaacacaaagcaaga 60
Query: 62 atcggtcgataaacctctgcatcca 86
|||||||||||||||||||||||||
Sbjct: 61 atcggtcgataaacctctgcatcca 85
>45545_miR162:micropc
Length = 91
Score = 79.8 bits (40), Expect = 3e-16
Identities = 81/91 (89%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctga--atttggctgtg-gaagaacacaaag- 56
|||||||||||||||||||||||||||||||| |||| | |||| ||| ||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaata 60
Query: 57 caagaatcggtcgataaacctctgcatccag 87
|| |||||| |||||||||||||||||||||
Sbjct: 61 catgaatcgatcgataaacctctgcatccag 91
>44984_miR162:micropc
Length = 85
Score = 77.8 bits (39), Expect = 1e-15
Identities = 77/87 (88%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgaatttggctgtggaagaacacaaagcaag 60
||||| ||||||||||||||||||||||||||| ||| |||| || || || | ||||
Sbjct: 1 ctggatgcagcggttcatcgatctcttcctgaaattgt-tgtgaaaaaag-cagatcaag 58
Query: 61 aatcggtcgataaacctctgcatccag 87
|||||||||||||||||||||||||||
Sbjct: 59 aatcggtcgataaacctctgcatccag 85
>46511_miR162:micropc
Length = 89
Score = 75.8 bits (38), Expect = 5e-15
Identities = 79/89 (88%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatctcttcctga--atttggctgtg-gaagaacacaaag-c 57
||||||||||||||||||||||||||||||| |||| | |||| ||| |||||||| |
Sbjct: 1 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaatac 60
Query: 58 aagaatcggtcgataaacctctgcatcca 86
| |||||| ||||||||||||||||||||
Sbjct: 61 atgaatcgatcgataaacctctgcatcca 89
>46792_miR162:micropc
Length = 83
Score = 73.8 bits (37), Expect = 2e-14
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatctcttcctgaatttggctgtggaagaacacaaagcaaga 61
|||| ||||||||||||||||||||||||||| ||| |||| || || || | |||||
Sbjct: 1 tggatgcagcggttcatcgatctcttcctgaaattgt-tgtgaaaaaag-cagatcaaga 58
Query: 62 atcggtcgataaacctctgcatcca 86
|||||||||||||||||||||||||
Sbjct: 59 atcggtcgataaacctctgcatcca 83
>46549_miR162:micropc
Length = 92
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctg 31
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
|||||| |||||||||||||||||||||
Sbjct: 65 gaatcgatcgataaacctctgcatccag 92
>46039_miR162:micropc
Length = 92
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctg 31
>45921_miR162:micropc
Length = 110
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctg 31
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tcgataaacctctgcatccag 87
|||||||||||||||||||||
Sbjct: 90 tcgataaacctctgcatccag 110
>46504_miR162:micropc
Length = 90
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatctcttcctg 31
||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg 30
>45903_miR162:micropc
Length = 90
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatctcttcctg 31
||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg 30
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatcca 86
|||||| ||||||||||||||||||||
Sbjct: 64 gaatcgatcgataaacctctgcatcca 90
>45508_miR162:micropc
Length = 108
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatctcttcctg 31
||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg 30
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 67 tcgataaacctctgcatcca 86
||||||||||||||||||||
Sbjct: 89 tcgataaacctctgcatcca 108
>46456_miR162:micropc
Length = 89
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 3 ggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||
Sbjct: 4 ggaggcagcggttcatcgatctcttcctg 32
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 tcgataaacctctgcatccag 87
|||||||||||||||||||||
Sbjct: 69 tcgataaacctctgcatccag 89
>45283_miR162:micropc
Length = 87
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 3 ggaggcagcggttcatcgatctcttcctg 31
|||||||||||||||||||||||||||||
Sbjct: 3 ggaggcagcggttcatcgatctcttcctg 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 67 tcgataaacctctgcatcca 86
||||||||||||||||||||
Sbjct: 68 tcgataaacctctgcatcca 87
>46628_miR162:micropc
Length = 136
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
||||||||||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatccag 136
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcc 29
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
>46169_miR162:micropc
Length = 136
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
||||||||||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatccag 136
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcc 29
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
>46026_miR162:micropc
Length = 87
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcctgaattt 36
||||| |||||||||||||||||| |||||||||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcctgaattt 36
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
||||||||||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatccag 87
>45617_miR162:micropc
Length = 88
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
||||||||||||||||||||||||||||
Sbjct: 61 gaatcggtcgataaacctctgcatccag 88
>45084_miR162:micropc
Length = 136
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
||||||||||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatccag 136
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcc 29
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
>44890_miR162:micropc
Length = 141
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
||||||||||||||||||||||||||||
Sbjct: 114 gaatcggtcgataaacctctgcatccag 141
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcc 29
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
>44807_miR162:micropc
Length = 141
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
||||||||||||||||||||||||||||
Sbjct: 114 gaatcggtcgataaacctctgcatccag 141
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatctcttcc 29
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
>46557_miR162:micropc
Length = 85
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatctcttcctgaattt 36
|||| |||||||||||||||||| |||||||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcctgaattt 35
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatcca 86
|||||||||||||||||||||||||||
Sbjct: 59 gaatcggtcgataaacctctgcatcca 85
>46470_miR162:micropc
Length = 135
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatcca 86
|||||||||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatcca 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatctcttcc 29
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
>45868_miR162:micropc
Length = 135
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatcca 86
|||||||||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatcca 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatctcttcc 29
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
>45757_miR162:micropc
Length = 86
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatcca 86
|||||||||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatcca 86
>45605_miR162:micropc
Length = 135
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatcca 86
|||||||||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatcca 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatctcttcc 29
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
>45416_miR162:micropc
Length = 139
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatcca 86
|||||||||||||||||||||||||||
Sbjct: 113 gaatcggtcgataaacctctgcatcca 139
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatctcttcc 29
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
>45197_miR162:micropc
Length = 139
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatcca 86
|||||||||||||||||||||||||||
Sbjct: 113 gaatcggtcgataaacctctgcatcca 139
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatctcttcc 29
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
>46676_miR162:micropc
Length = 97
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 54 aagcaagaatcggtcgataaacctctgcatccag 87
||||| |||||| |||||||||||||||||||||
Sbjct: 64 aagcatgaatcgatcgataaacctctgcatccag 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatc 23
>44934_miR162:micropc
Length = 97
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 54 aagcaagaatcggtcgataaacctctgcatccag 87
||||| |||||| |||||||||||||||||||||
Sbjct: 64 aagcatgaatcgatcgataaacctctgcatccag 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatc 23
>46394_miR162:micropc
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 54 aagcaagaatcggtcgataaacctctgcatcca 86
||||| |||||| ||||||||||||||||||||
Sbjct: 63 aagcatgaatcgatcgataaacctctgcatcca 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatc 23
||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatc 22
>46364_miR162:micropc
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 54 aagcaagaatcggtcgataaacctctgcatcca 86
||||| |||||| ||||||||||||||||||||
Sbjct: 63 aagcatgaatcgatcgataaacctctgcatcca 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatc 23
||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatc 22
>46817_miR162:micropc
Length = 93
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
|||||| |||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatccag 93
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatc 23
>45991_miR162:micropc
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
|||||| |||||||||||||||||||||
Sbjct: 81 gaatcgatcgataaacctctgcatccag 108
>45901_miR162:micropc
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
|||||| |||||||||||||||||||||
Sbjct: 84 gaatcgatcgataaacctctgcatccag 111
>45749_miR162:micropc
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatccag 87
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccag 99
>46597_miR162:micropc
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatcca 86
|||||| ||||||||||||||||||||
Sbjct: 65 gaatcgatcgataaacctctgcatcca 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatc 23
||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatc 22
>46457_miR162:micropc
Length = 109
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatcca 86
|||||| ||||||||||||||||||||
Sbjct: 83 gaatcgatcgataaacctctgcatcca 109
>46090_miR162:micropc
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatcca 86
|||||| ||||||||||||||||||||
Sbjct: 71 gaatcgatcgataaacctctgcatcca 97
>44845_miR162:micropc
Length = 106
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 60 gaatcggtcgataaacctctgcatcca 86
|||||| ||||||||||||||||||||
Sbjct: 80 gaatcgatcgataaacctctgcatcca 106
>45279_miR162:micropc
Length = 114
Score = 42.1 bits (21), Expect = 6e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 51 acaaagcaagaatcggtcgataaacctctgcatccag 87
|||| ||| |||||| ||||||| |||||||||||||
Sbjct: 78 acaacgcaggaatcgatcgataagcctctgcatccag 114
>45338_miR162:micropc
Length = 112
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 51 acaaagcaagaatcggtcgataaacctctgcatcca 86
|||| ||| |||||| ||||||| ||||||||||||
Sbjct: 77 acaacgcaggaatcgatcgataagcctctgcatcca 112
