miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46276_miR172:micropc
Length = 104
Score = 206 bits (104), Expect = 2e-54
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1 gcagcgtcctcaagattcacatccagtctaaaggcaaaagcagcaatttttcttcatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagcgtcctcaagattcacatccagtctaaaggcaaaagcagcaatttttcttcatttt 60
Query: 61 tgcttgccttggtttttgtcagtgagaatcttgatgatgctgca 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcttgccttggtttttgtcagtgagaatcttgatgatgctgca 104
>45323_miR172:micropc
Length = 104
Score = 206 bits (104), Expect = 2e-54
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1 gcagcgtcctcaagattcacatccagtctaaaggcaaaagcagcaatttttcttcatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagcgtcctcaagattcacatccagtctaaaggcaaaagcagcaatttttcttcatttt 60
Query: 61 tgcttgccttggtttttgtcagtgagaatcttgatgatgctgca 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcttgccttggtttttgtcagtgagaatcttgatgatgctgca 104
>46277_miR172:micropc
Length = 104
Score = 182 bits (92), Expect = 3e-47
Identities = 101/104 (97%)
Strand = Plus / Plus
Query: 1 gcagcgtcctcaagattcacatccagtctaaaggcaaaagcagcaatttttcttcatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gcagcgtcctcaagattcacatccagtctaaaggcaaaagcagcaatttttcttcttttt 60
Query: 61 tgcttgccttggtttttgtcagtgagaatcttgatgatgctgca 104
||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 61 tgcttgccttggtttttgtgagggagaatcttgatgatgctgca 104
>45834_miR172:micropc
Length = 104
Score = 182 bits (92), Expect = 3e-47
Identities = 101/104 (97%)
Strand = Plus / Plus
Query: 1 gcagcgtcctcaagattcacatccagtctaaaggcaaaagcagcaatttttcttcatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gcagcgtcctcaagattcacatccagtctaaaggcaaaagcagcaatttttcttcttttt 60
Query: 61 tgcttgccttggtttttgtcagtgagaatcttgatgatgctgca 104
||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 61 tgcttgccttggtttttgtgagggagaatcttgatgatgctgca 104
>45458_miR172:micropc
Length = 104
Score = 182 bits (92), Expect = 3e-47
Identities = 101/104 (97%)
Strand = Plus / Plus
Query: 1 gcagcgtcctcaagattcacatccagtctaaaggcaaaagcagcaatttttcttcatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gcagcgtcctcaagattcacatccagtctaaaggcaaaagcagcaatttttcttcttttt 60
Query: 61 tgcttgccttggtttttgtcagtgagaatcttgatgatgctgca 104
||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 61 tgcttgccttggtttttgtgagggagaatcttgatgatgctgca 104
>46677_miR172:micropc
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tgagaatcttgatgatgctgca 104
||||||||||||||||||||||
Sbjct: 66 tgagaatcttgatgatgctgca 87
>46569_miR172:micropc
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tgagaatcttgatgatgctgca 104
||||||||||||||||||||||
Sbjct: 105 tgagaatcttgatgatgctgca 126
>46487_miR172:micropc
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tgagaatcttgatgatgctgca 104
||||||||||||||||||||||
Sbjct: 65 tgagaatcttgatgatgctgca 86
>46413_miR172:micropc
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tgagaatcttgatgatgctgca 104
||||||||||||||||||||||
Sbjct: 66 tgagaatcttgatgatgctgca 87
>46305_miR172:micropc
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tgagaatcttgatgatgctgca 104
||||||||||||||||||||||
Sbjct: 66 tgagaatcttgatgatgctgca 87
>45569_miR172:micropc
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tgagaatcttgatgatgctgca 104
||||||||||||||||||||||
Sbjct: 65 tgagaatcttgatgatgctgca 86
>45392_miR172:micropc
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tgagaatcttgatgatgctgca 104
||||||||||||||||||||||
Sbjct: 66 tgagaatcttgatgatgctgca 87
>44866_miR172:micropc
Length = 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tgagaatcttgatgatgctgca 104
||||||||||||||||||||||
Sbjct: 106 tgagaatcttgatgatgctgca 127
>44830_miR172:micropc
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tgagaatcttgatgatgctgca 104
||||||||||||||||||||||
Sbjct: 65 tgagaatcttgatgatgctgca 86
>44791_miR172:micropc
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 tgagaatcttgatgatgctgca 104
||||||||||||||||||||||
Sbjct: 65 tgagaatcttgatgatgctgca 86
>46620_miR172:micropc
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 gagaatcttgatgatgctgca 104
|||||||||||||||||||||
Sbjct: 85 gagaatcttgatgatgctgca 105
>45550_miR172:micropc
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 gagaatcttgatgatgctgca 104
|||||||||||||||||||||
Sbjct: 84 gagaatcttgatgatgctgca 104
>46634_miR172:micropc
Length = 150
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 81 agtgagaatcttgatgatgctgca 104
|||| |||||||||||||||||||
Sbjct: 126 agtgggaatcttgatgatgctgca 149
>46120_miR172:micropc
Length = 150
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 81 agtgagaatcttgatgatgctgca 104
|||| |||||||||||||||||||
Sbjct: 126 agtgggaatcttgatgatgctgca 149
>45430_miR172:micropc
Length = 149
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 81 agtgagaatcttgatgatgctgca 104
|||| |||||||||||||||||||
Sbjct: 126 agtgggaatcttgatgatgctgca 149
