miRNEST 2.0, an integrative microRNA resource :: BLAST
>46658_miR1436:micropc
Length = 79
Score = 101 bits (51), Expect = 7e-23
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 1 cctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtcttac 60
|||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||
Sbjct: 3 cctccgtcccgtaatgtaagacgttttttgacactacaatagagtcaaaaaacgtcttac 62
Query: 61 gttatgggacagagg 75
||||||||| ||||
Sbjct: 63 attatgggacggagg 77
Score = 69.9 bits (35), Expect = 2e-13
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 1 cctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtcttac 60
|||||||||||||||||||||| ||||||||| || ||| |||||||||||||||||
Sbjct: 77 cctccgtcccataatgtaagacgttttttgactctattgtagtgtcaaaaaacgtcttac 18
Query: 61 gttatgggacagagg 75
||| ||||| ||||
Sbjct: 17 attacgggacggagg 3
>46077_miR1130:micropc
Length = 75
Score = 101 bits (51), Expect = 7e-23
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 1 cctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtcttac 60
|||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||
Sbjct: 1 cctccgtcccgtaatgtaagacgttttttgacactacaatagagtcaaaaaacgtcttac 60
Query: 61 gttatgggacagagg 75
||||||||| ||||
Sbjct: 61 attatgggacggagg 75
Score = 69.9 bits (35), Expect = 2e-13
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 1 cctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtcttac 60
|||||||||||||||||||||| ||||||||| || ||| |||||||||||||||||
Sbjct: 75 cctccgtcccataatgtaagacgttttttgactctattgtagtgtcaaaaaacgtcttac 16
Query: 61 gttatgggacagagg 75
||| ||||| ||||
Sbjct: 15 attacgggacggagg 1
>45479_miR1436:micropc
Length = 83
Score = 77.8 bits (39), Expect = 1e-15
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 5 cgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtcttacgtta 64
||||||||||||||||| |||||||||| ||||||| ||||| |||| ||||||| |||
Sbjct: 75 cgtcccataatgtaagatgttttttgacactacactacagtcagaaaatgtcttacatta 16
Query: 65 tgggacagagg 75
||||||||||
Sbjct: 15 cgggacagagg 5
Score = 52.0 bits (26), Expect = 5e-08
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 1 cctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtcttac 60
|||| ||||| |||||||||||||||| |||| || ||| |||||||||| ||||||
Sbjct: 5 cctctgtcccgtaatgtaagacattttctgactgtagtgtagtgtcaaaaaacatcttac 64
Query: 61 gttatgggac 70
|||||||||
Sbjct: 65 attatgggac 74
>46187_miR1132:micropc
Length = 82
Score = 73.8 bits (37), Expect = 1e-14
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 1 cctccgtcccataatgtaagacattttttgaca-ttacactagagtcaaaaaacgtctta 59
|||||||||||||||||||||| |||||| ||| |||||||| |||||| |||||||||
Sbjct: 4 cctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaacgtctta 63
Query: 60 cgttatgg 67
| ||||||
Sbjct: 64 cattatgg 71
Score = 50.1 bits (25), Expect = 2e-07
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 1 cctccgtcccataatgtaagacattttttgacattacacta-gagtcaaaaaacgtctta 59
||||||| |||||||||||||| || ||||||| || || | || |||||||||||||
Sbjct: 79 cctccgttccataatgtaagacgttntttgacactagtgtacgtgtgaaaaaacgtctta 20
Query: 60 cgttatgggacagagg 75
| ||||||||| ||||
Sbjct: 19 cattatgggacggagg 4
>46428_miR1436:micropc
Length = 69
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1 cctccgtcccataatgtaagacattttttg 30
|||||||||||||||||||||| |||||||
Sbjct: 65 cctccgtcccataatgtaagacgttttttg 36
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 cctccgtcccataatgtaagacattttttgaca 33
||||||| |||||||||||||| ||||||||||
Sbjct: 5 cctccgttccataatgtaagacgttttttgaca 37
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 46 caaaaaacgtcttacgttatgggacagagg 75
||||||||||||||| ||||||||| ||||
Sbjct: 36 caaaaaacgtcttacattatgggacggagg 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 44 gtcaaaaaacgtcttacgttatgg 67
||||||||||||||||| ||||||
Sbjct: 36 gtcaaaaaacgtcttacattatgg 13
>46264_miR1436:micropc
Length = 69
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1 cctccgtcccataatgtaagacattttttg 30
|||||||||||||||||||||| |||||||
Sbjct: 65 cctccgtcccataatgtaagacgttttttg 36
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 cctccgtcccataatgtaagacattttttgaca 33
||||||| |||||||||||||| ||||||||||
Sbjct: 5 cctccgttccataatgtaagacgttttttgaca 37
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 46 caaaaaacgtcttacgttatgggacagagg 75
||||||||||||||| ||||||||| ||||
Sbjct: 36 caaaaaacgtcttacattatgggacggagg 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 44 gtcaaaaaacgtcttacgttatgg 67
||||||||||||||||| ||||||
Sbjct: 36 gtcaaaaaacgtcttacattatgg 13
>45393_miR1436:micropc
Length = 69
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1 cctccgtcccataatgtaagacattttttg 30
|||||||||||||||||||||| |||||||
Sbjct: 65 cctccgtcccataatgtaagacgttttttg 36
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 cctccgtcccataatgtaagacattttttgaca 33
||||||| |||||||||||||| ||||||||||
Sbjct: 5 cctccgttccataatgtaagacgttttttgaca 37
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 46 caaaaaacgtcttacgttatgggacagagg 75
||||||||||||||| ||||||||| ||||
Sbjct: 36 caaaaaacgtcttacattatgggacggagg 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 44 gtcaaaaaacgtcttacgttatgg 67
||||||||||||||||| ||||||
Sbjct: 36 gtcaaaaaacgtcttacattatgg 13
>45005_miR1436:micropc
Length = 69
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1 cctccgtcccataatgtaagacattttttg 30
|||||||||||||||||||||| |||||||
Sbjct: 65 cctccgtcccataatgtaagacgttttttg 36
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 cctccgtcccataatgtaagacattttttgaca 33
||||||| |||||||||||||| ||||||||||
Sbjct: 5 cctccgttccataatgtaagacgttttttgaca 37
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 46 caaaaaacgtcttacgttatgggacagagg 75
||||||||||||||| ||||||||| ||||
Sbjct: 36 caaaaaacgtcttacattatgggacggagg 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 44 gtcaaaaaacgtcttacgttatgg 67
||||||||||||||||| ||||||
Sbjct: 36 gtcaaaaaacgtcttacattatgg 13
>44928_miR1436:micropc
Length = 69
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1 cctccgtcccataatgtaagacattttttg 30
|||||||||||||||||||||| |||||||
Sbjct: 65 cctccgtcccataatgtaagacgttttttg 36
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 cctccgtcccataatgtaagacattttttgaca 33
||||||| |||||||||||||| ||||||||||
Sbjct: 5 cctccgttccataatgtaagacgttttttgaca 37
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 46 caaaaaacgtcttacgttatgggacagagg 75
||||||||||||||| ||||||||| ||||
Sbjct: 36 caaaaaacgtcttacattatgggacggagg 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 44 gtcaaaaaacgtcttacgttatgg 67
||||||||||||||||| ||||||
Sbjct: 36 gtcaaaaaacgtcttacattatgg 13
>46467_miR1130:micropc
Length = 56
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 cctccgtcccataatgtaagacattttttgaca 33
|||||||| ||||||||||||| ||||||||||
Sbjct: 1 cctccgtctcataatgtaagacgttttttgaca 33
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 44 gtcaaaaaacgtcttacgttatgggacagagg 75
||||||||||||||||| ||||| ||| ||||
Sbjct: 32 gtcaaaaaacgtcttacattatgagacggagg 1
>45448_miR1436:micropc
Length = 64
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 cctccgtcccataatgtaagacattttttgaca 33
|||||||| ||||||||||||| ||||||||||
Sbjct: 5 cctccgtctcataatgtaagacgttttttgaca 37
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 44 gtcaaaaaacgtcttacgttatgggacagagg 75
||||||||||||||||| ||||| ||| ||||
Sbjct: 36 gtcaaaaaacgtcttacattatgagacggagg 5
>45044_miR1130:micropc
Length = 56
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 cctccgtcccataatgtaagacattttttgaca 33
|||||||| ||||||||||||| ||||||||||
Sbjct: 1 cctccgtctcataatgtaagacgttttttgaca 33
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 44 gtcaaaaaacgtcttacgttatgggacagagg 75
||||||||||||||||| ||||| ||| ||||
Sbjct: 32 gtcaaaaaacgtcttacattatgagacggagg 1
