miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46728_miR408:micropc
          Length = 87

 Score =  172 bits (87), Expect = 3e-44
 Identities = 87/87 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  gacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggct 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggct 60

                                     
Query: 61 ctactcatgcactgcctcttccctggc 87
          |||||||||||||||||||||||||||
Sbjct: 61 ctactcatgcactgcctcttccctggc 87




>45531_miR408:micropc
          Length = 89

 Score =  172 bits (87), Expect = 3e-44
 Identities = 87/87 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  gacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggct 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2  gacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggct 61

                                     
Query: 61 ctactcatgcactgcctcttccctggc 87
          |||||||||||||||||||||||||||
Sbjct: 62 ctactcatgcactgcctcttccctggc 88




>45860_miR408:micropc
          Length = 87

 Score =  117 bits (59), Expect = 1e-27
 Identities = 80/87 (91%)
 Strand = Plus / Plus

                                                                      
Query: 1  gacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggct 60
          ||||||||  ||||||||||||||||||||||||||||||| | |  |||||||||||||
Sbjct: 1  gacagggacgaggtagagcatggatggagttcccaacagaacagtcaagctgttgtggct 60

                                     
Query: 61 ctactcatgcactgcctcttccctggc 87
          | |||||||||||||||||||||||||
Sbjct: 61 ccactcatgcactgcctcttccctggc 87




>45398_miR408:micropc
          Length = 89

 Score =  117 bits (59), Expect = 1e-27
 Identities = 80/87 (91%)
 Strand = Plus / Plus

                                                                      
Query: 1  gacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggct 60
          ||||||||  ||||||||||||||||||||||||||||||| | |  |||||||||||||
Sbjct: 2  gacagggacgaggtagagcatggatggagttcccaacagaacagtcaagctgttgtggct 61

                                     
Query: 61 ctactcatgcactgcctcttccctggc 87
          | |||||||||||||||||||||||||
Sbjct: 62 ccactcatgcactgcctcttccctggc 88




>45090_miR408:micropc
          Length = 87

 Score =  117 bits (59), Expect = 1e-27
 Identities = 80/87 (91%)
 Strand = Plus / Plus

                                                                      
Query: 1  gacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggct 60
          ||||||||  ||||||||||||||||||||||||||||||| | |  |||||||||||||
Sbjct: 1  gacagggacgaggtagagcatggatggagttcccaacagaacagtcaagctgttgtggct 60

                                     
Query: 61 ctactcatgcactgcctcttccctggc 87
          | |||||||||||||||||||||||||
Sbjct: 61 ccactcatgcactgcctcttccctggc 87




>45949_miR408:micropc
          Length = 99

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                               
Query: 51 tgttgtggctctactcatgcactgcctcttccctggc 87
          |||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgttgtggctctactcatgcactgcctcttccctggc 99




>45551_miR408:micropc
          Length = 99

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                               
Query: 51 tgttgtggctctactcatgcactgcctcttccctggc 87
          |||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgttgtggctctactcatgcactgcctcttccctggc 99




>46401_miR408:micropc
          Length = 83

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 70/83 (84%), Gaps = 4/83 (4%)
 Strand = Plus / Plus

                                                                      
Query: 5  gggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggctctac 64
          ||||||||| ||||||||||||||| | | |||||||  | |    |||| |||||||||
Sbjct: 5  gggaacaggcagagcatggatggagctactaacagaagtaca----tgttttggctctac 60

                                 
Query: 65 tcatgcactgcctcttccctggc 87
           ||||||||||||||||||||||
Sbjct: 61 ccatgcactgcctcttccctggc 83




>45814_miR408:micropc
          Length = 85

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 70/83 (84%), Gaps = 4/83 (4%)
 Strand = Plus / Plus

                                                                      
Query: 5  gggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggctctac 64
          ||||||||| ||||||||||||||| | | |||||||  | |    |||| |||||||||
Sbjct: 6  gggaacaggcagagcatggatggagctactaacagaagtaca----tgttttggctctac 61

                                 
Query: 65 tcatgcactgcctcttccctggc 87
           ||||||||||||||||||||||
Sbjct: 62 ccatgcactgcctcttccctggc 84




>45726_miR408:micropc
          Length = 83

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 70/83 (84%), Gaps = 4/83 (4%)
 Strand = Plus / Plus

                                                                      
Query: 5  gggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggctctac 64
          ||||||||| ||||||||||||||| | | |||||||  | |    |||| |||||||||
Sbjct: 5  gggaacaggcagagcatggatggagctactaacagaagtaca----tgttttggctctac 60

                                 
Query: 65 tcatgcactgcctcttccctggc 87
           ||||||||||||||||||||||
Sbjct: 61 ccatgcactgcctcttccctggc 83




>46505_miR408:micropc
          Length = 83

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                               
Query: 51 tgttgtggctctactcatgcactgcctcttccctggc 87
          |||| ||||||||| ||||||||||||||||||||||
Sbjct: 47 tgttttggctctacccatgcactgcctcttccctggc 83




>46052_miR408:micropc
          Length = 83

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                               
Query: 51 tgttgtggctctactcatgcactgcctcttccctggc 87
          |||| ||||||||| ||||||||||||||||||||||
Sbjct: 47 tgttttggctctacccatgcactgcctcttccctggc 83




>45593_miR408:micropc
          Length = 85

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                               
Query: 51 tgttgtggctctactcatgcactgcctcttccctggc 87
          |||| ||||||||| ||||||||||||||||||||||
Sbjct: 48 tgttttggctctacccatgcactgcctcttccctggc 84




>46359_miR408:micropc
          Length = 85

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                
Query: 50 ctgttgtggctctactcatgcactgcctcttccctggc 87
          ||||| |||||  |||||||||||||||||||||||||
Sbjct: 47 ctgttttggcttcactcatgcactgcctcttccctggc 84




>46309_miR408:micropc
          Length = 83

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                
Query: 50 ctgttgtggctctactcatgcactgcctcttccctggc 87
          ||||| |||||  |||||||||||||||||||||||||
Sbjct: 46 ctgttttggcttcactcatgcactgcctcttccctggc 83




>46155_miR408:micropc
          Length = 83

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                
Query: 50 ctgttgtggctctactcatgcactgcctcttccctggc 87
          ||||| |||||  |||||||||||||||||||||||||
Sbjct: 46 ctgttttggcttcactcatgcactgcctcttccctggc 83




>45394_miR408:micropc
          Length = 112

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 50  ctgttgtggctctactcatgcactgcctcttccctggc 87
           |||||||||||   ||||||||||||||||||||||||
Sbjct: 74  ctgttgtggctacgctcatgcactgcctcttccctggc 111




>44968_miR408:micropc
          Length = 110

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 50  ctgttgtggctctactcatgcactgcctcttccctggc 87
           |||||||||||   ||||||||||||||||||||||||
Sbjct: 73  ctgttgtggctacgctcatgcactgcctcttccctggc 110




>44861_miR408:micropc
          Length = 121

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 50  ctgttgtggctctactcatgcactgcctcttccctggc 87
           |||||||||||   ||||||||||||||||||||||||
Sbjct: 83  ctgttgtggctacgctcatgcactgcctcttccctggc 120




>44821_miR408:micropc
          Length = 119

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 50  ctgttgtggctctactcatgcactgcctcttccctggc 87
           |||||||||||   ||||||||||||||||||||||||
Sbjct: 82  ctgttgtggctacgctcatgcactgcctcttccctggc 119