miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46601_miR444:micropc
Length = 151
Score = 285 bits (144), Expect = 4e-78
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 1 accaagcatgaggcaacaactgcagtacttgtggggaaggcacaagtaggacaccaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 accaagcatgaggcaacaactgcagtacttgtggggaaggcacaagtaggacaccaacat 62
Query: 61 tacctgcaagcaagacgcaaaattaatagaacatcaccatacttgtggctttcttgcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tacctgcaagcaagacgcaaaattaatagaacatcaccatacttgtggctttcttgcaag 122
Query: 121 tcgtgcagttgctgcctcaagctt 144
||||||||||||||||||||||||
Sbjct: 123 tcgtgcagttgctgcctcaagctt 146
>45144_miR444:micropc
Length = 151
Score = 285 bits (144), Expect = 4e-78
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 1 accaagcatgaggcaacaactgcagtacttgtggggaaggcacaagtaggacaccaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 accaagcatgaggcaacaactgcagtacttgtggggaaggcacaagtaggacaccaacat 62
Query: 61 tacctgcaagcaagacgcaaaattaatagaacatcaccatacttgtggctttcttgcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tacctgcaagcaagacgcaaaattaatagaacatcaccatacttgtggctttcttgcaag 122
Query: 121 tcgtgcagttgctgcctcaagctt 144
||||||||||||||||||||||||
Sbjct: 123 tcgtgcagttgctgcctcaagctt 146
>44855_miR444:micropc
Length = 144
Score = 285 bits (144), Expect = 4e-78
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 1 accaagcatgaggcaacaactgcagtacttgtggggaaggcacaagtaggacaccaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accaagcatgaggcaacaactgcagtacttgtggggaaggcacaagtaggacaccaacat 60
Query: 61 tacctgcaagcaagacgcaaaattaatagaacatcaccatacttgtggctttcttgcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacctgcaagcaagacgcaaaattaatagaacatcaccatacttgtggctttcttgcaag 120
Query: 121 tcgtgcagttgctgcctcaagctt 144
||||||||||||||||||||||||
Sbjct: 121 tcgtgcagttgctgcctcaagctt 144
>46094_miR444:micropc
Length = 151
Score = 198 bits (100), Expect = 8e-52
Identities = 130/140 (92%)
Strand = Plus / Plus
Query: 5 agcatgaggcaacaactgcagtacttgtggggaaggcacaagtaggacaccaacattacc 64
|||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||||
Sbjct: 7 agcatgaggcaacaactgcattacttgcggggaaggcgcaagtaggacacctgcattact 66
Query: 65 tgcaagcaagacgcaaaattaatagaacatcaccatacttgtggctttcttgcaagtcgt 124
||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 67 tgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttcttgcaagtcat 126
Query: 125 gcagttgctgcctcaagctt 144
||||||||||||||||||||
Sbjct: 127 gcagttgctgcctcaagctt 146
>45904_miR444:micropc
Length = 141
Score = 198 bits (100), Expect = 8e-52
Identities = 130/140 (92%)
Strand = Plus / Plus
Query: 5 agcatgaggcaacaactgcagtacttgtggggaaggcacaagtaggacaccaacattacc 64
|||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||||
Sbjct: 2 agcatgaggcaacaactgcattacttgcggggaaggcgcaagtaggacacctgcattact 61
Query: 65 tgcaagcaagacgcaaaattaatagaacatcaccatacttgtggctttcttgcaagtcgt 124
||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 62 tgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttcttgcaagtcat 121
Query: 125 gcagttgctgcctcaagctt 144
||||||||||||||||||||
Sbjct: 122 gcagttgctgcctcaagctt 141
>45055_miR444:micropc
Length = 95
Score = 188 bits (95), Expect = 8e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 27 acttgtggggaaggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaa 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttgtggggaaggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaa 60
Query: 87 tagaacatcaccatacttgtggctttcttgcaagt 121
|||||||||||||||||||||||||||||||||||
Sbjct: 61 tagaacatcaccatacttgtggctttcttgcaagt 95
>46197_miR444:micropc
Length = 95
Score = 125 bits (63), Expect = 1e-29
Identities = 87/95 (91%)
Strand = Plus / Plus
Query: 27 acttgtggggaaggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaa 86
||||| ||||||||| ||||||||||||| |||||| ||||| |||| |||||||||||
Sbjct: 1 acttgcggggaaggcgcaagtaggacacctgcattacttgcaaacaaggcgcaaaattaa 60
Query: 87 tagaacatcaccatacttgtggctttcttgcaagt 121
||||| |||||||||||||||||||||||||||||
Sbjct: 61 tagaagatcaccatacttgtggctttcttgcaagt 95
>46669_miR444:micropc
Length = 136
Score = 81.8 bits (41), Expect = 1e-16
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 96 accatacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 88 accatacttgtggctttcttgcaagttgtgcagttgttgcctcaagctt 136
Score = 46.1 bits (23), Expect = 7e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 102 cttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||| ||||||||||||| ||||||| |||||||| ||||
Sbjct: 43 cttgtgactttcttgcaagtaatgcagttcctgcctcatgctt 1
>46544_miR444:micropc
Length = 136
Score = 81.8 bits (41), Expect = 1e-16
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 96 accatacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 88 accatacttgtggctttcttgcaagttgtgcagttgttgcctcaagctt 136
Score = 46.1 bits (23), Expect = 7e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 102 cttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||| ||||||||||||| ||||||| |||||||| ||||
Sbjct: 43 cttgtgactttcttgcaagtaatgcagttcctgcctcatgctt 1
>45665_miR444:micropc
Length = 111
Score = 81.8 bits (41), Expect = 1e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 100 tacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 62 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagctt 106
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 accaagcatgaggcaacaactgcagtacttg 31
|||||||||||||||||||||||| ||||||
Sbjct: 3 accaagcatgaggcaacaactgcattacttg 33
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 103 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 144
||||| ||||||||||||| |||||||| ||||||| ||||
Sbjct: 47 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgctt 6
>45334_miR444:micropc
Length = 101
Score = 81.8 bits (41), Expect = 1e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 100 tacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 57 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagctt 101
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 aagcatgaggcaacaactgcagtacttg 31
||||||||||||||||||||| ||||||
Sbjct: 1 aagcatgaggcaacaactgcattacttg 28
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 103 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 144
||||| ||||||||||||| |||||||| ||||||| ||||
Sbjct: 42 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgctt 1
>45742_miR444:micropc
Length = 103
Score = 69.9 bits (35), Expect = 5e-13
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 98 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 144
||||||||||| |||||||||||| ||||||||| ||||||||||||
Sbjct: 57 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 103 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 144
||||| ||||||||||||| ||||||| |||||||| ||||
Sbjct: 42 ttgtgactttcttgcaagtaatgcagttcctgcctcatgctt 1
>45712_miR444:micropc
Length = 103
Score = 69.9 bits (35), Expect = 5e-13
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 98 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 144
||||||||||| |||||||||||| ||||||||| ||||||||||||
Sbjct: 57 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 103 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 144
||||| ||||||||||||| ||||||| |||||||| ||||
Sbjct: 42 ttgtgactttcttgcaagtaatgcagttcctgcctcatgctt 1
>46412_miR444:micropc
Length = 103
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 109 ctttcttgcaagtcgtgcagttgctgcctcaagctt 144
||||||||||||| |||||||||||| |||||||||
Sbjct: 36 ctttcttgcaagttgtgcagttgctgtctcaagctt 1
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 4 aagcatgaggcaacaactgcagtactt 30
||||||||||||||||||||| |||||
Sbjct: 103 aagcatgaggcaacaactgcattactt 77
>45976_miR444:micropc
Length = 133
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 109 ctttcttgcaagtcgtgcagttgctgcctcaagctt 144
||||||||||||| ||||||||| ||||||||||||
Sbjct: 98 ctttcttgcaagttgtgcagttgttgcctcaagctt 133
>46185_miR444:micropc
Length = 108
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||| |||||||||||| |||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgctgtctcaagctt 102
>45562_miR444:micropc
Length = 96
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||| |||||||||||| |||||||||
Sbjct: 62 tttcttgcaagttgtgcagttgctgtctcaagctt 96
>44872_miR444:micropc
Length = 106
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||| |||||||||||| |||||||||
Sbjct: 67 tttcttgcaagttgtgcagttgctgtctcaagctt 101
>46519_miR444:micropc
Length = 59
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 96 accatacttgtggctttcttgcaagt 121
||||||||||||||||||||||||||
Sbjct: 32 accatacttgtggctttcttgcaagt 57
>45278_miR444:micropc
Length = 59
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 96 accatacttgtggctttcttgcaagt 121
||||||||||||||||||||||||||
Sbjct: 32 accatacttgtggctttcttgcaagt 57
>46570_miR444:micropc
Length = 173
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 catacttgtggctttcttgcaagt 121
||||||||||||||||||||||||
Sbjct: 148 catacttgtggctttcttgcaagt 171
>46299_miR444:micropc
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 109 ctttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||| |||||| |||||||||||| |||||||||
Sbjct: 68 ctttctcgcaagttgtgcagttgctgtctcaagctt 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 4 aagcatgaggcaacaactgcagtacttg 31
||||||||||| ||||||||| ||||||
Sbjct: 1 aagcatgaggcgacaactgcattacttg 28
>45960_miR444:micropc
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 109 ctttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||| |||||| |||||||||||| |||||||||
Sbjct: 68 ctttctcgcaagttgtgcagttgctgtctcaagctt 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 4 aagcatgaggcaacaactgcagtacttg 31
||||||||||| ||||||||| ||||||
Sbjct: 1 aagcatgaggcgacaactgcattacttg 28
>45226_miR444:micropc
Length = 60
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 catacttgtggctttcttgcaagt 121
||||||||||||||||||||||||
Sbjct: 35 catacttgtggctttcttgcaagt 58
>46476_miR444:micropc
Length = 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||| ||||||||| || |||||||||
Sbjct: 62 tttcttgcaagttgtgcagttgttgtctcaagctt 96
>46210_miR444:micropc
Length = 102
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
||||||||||| |||||||||||||| |||||||
Sbjct: 35 tttcttgcaagatgtgcagttgctgccacaagctt 1
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||| ||||||||| || |||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgttgtctcaagctt 102
>45828_miR444:micropc
Length = 114
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
||||||||||| |||||||||||||| |||||||
Sbjct: 41 tttcttgcaagatgtgcagttgctgccacaagctt 7
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||| ||||||||| || |||||||||
Sbjct: 74 tttcttgcaagttgtgcagttgttgtctcaagctt 108
>45734_miR444:micropc
Length = 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||| ||||||||| || |||||||||
Sbjct: 62 tttcttgcaagttgtgcagttgttgtctcaagctt 96
>45697_miR444:micropc
Length = 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||| ||||||||| || |||||||||
Sbjct: 62 tttcttgcaagttgtgcagttgttgtctcaagctt 96
>45451_miR444:micropc
Length = 110
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||| ||||||||| || |||||||||
Sbjct: 70 tttcttgcaagttgtgcagttgttgtctcaagctt 104
>45238_miR444:micropc
Length = 108
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||| ||||||||| || |||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgttgtctcaagctt 102
>45175_miR444:micropc
Length = 98
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||| ||||||||| || |||||||||
Sbjct: 35 tttcttgcaagttgtgcagttgttgtctcaagctt 1
>45168_miR444:micropc
Length = 110
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||| ||||||||| || |||||||||
Sbjct: 70 tttcttgcaagttgtgcagttgttgtctcaagctt 104
>45135_miR444:micropc
Length = 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||| ||||||||| || |||||||||
Sbjct: 62 tttcttgcaagttgtgcagttgttgtctcaagctt 96
>45024_miR444:micropc
Length = 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
|||||||||||| ||||||||| || |||||||||
Sbjct: 35 tttcttgcaagttgtgcagttgttgtctcaagctt 1
>45525_miR444:micropc
Length = 94
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagct 143
|||||||||||| ||||||||| || ||||||||
Sbjct: 34 tttcttgcaagttgtgcagttgttgtctcaagct 1
>45001_miR444:micropc
Length = 57
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 100 tacttgtggctttcttgcaagt 121
||||||||||||||||||||||
Sbjct: 34 tacttgtggctttcttgcaagt 55
>46635_miR444:micropc
Length = 59
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 98 catacttgtggctttcttgcaagt 121
||||||||||| ||||||||||||
Sbjct: 34 catacttgtggttttcttgcaagt 57
>45131_miR444:micropc
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
||||||||| || ||||||||| || |||||||||
Sbjct: 68 tttcttgcangttgtgcagttgttgtctcaagctt 102
