miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45908_miR167:micropc
Length = 71
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactttcttctcgattaatcaaggaaagatcggatcatatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctaaactttcttctcgattaatcaaggaaagatcggatcatatg 62
Query: 61 gcagctt 67
|||||||
Sbjct: 63 gcagctt 69
>45795_miR167:micropc
Length = 71
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactttcttctcgattaatcaaggaaagatcggatcatatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctaaactttcttctcgattaatcaaggaaagatcggatcatatg 62
Query: 61 gcagctt 67
|||||||
Sbjct: 63 gcagctt 69
>45483_miR167:micropc
Length = 71
Score = 133 bits (67), Expect = 2e-32
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactttcttctcgattaatcaaggaaagatcggatcatatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctaaactttcttctcgattaatcaaggaaagatcggatcatatg 62
Query: 61 gcagctt 67
|||||||
Sbjct: 63 gcagctt 69
>46730_miR167:micropc
Length = 73
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactt 24
||||||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctaaactt 26
>46311_miR167:micropc
Length = 73
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactt 24
||||||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctaaactt 26
>46078_miR167:micropc
Length = 78
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactt 24
||||||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctaaactt 26
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 39 caaggaaagatcggatcatatggcagctt 67
|||||||||||| |||||||||| |||||
Sbjct: 48 caaggaaagatcagatcatatggtagctt 76
>45974_miR167:micropc
Length = 78
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactt 24
||||||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctaaactt 26
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 39 caaggaaagatcggatcatatggcagctt 67
|||||||||||| |||||||||| |||||
Sbjct: 48 caaggaaagatcagatcatatggtagctt 76
>45267_miR167:micropc
Length = 69
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactt 24
||||||||||||||||||||||||
Sbjct: 1 aagctgccagcatgatctaaactt 24
>46447_miR167:micropc
Length = 70
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactttc 26
|||||||||||||||||| |||||||
Sbjct: 1 aagctgccagcatgatctgaactttc 26
>46424_miR167:micropc
Length = 72
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactttc 26
|||||||||||||||||| |||||||
Sbjct: 1 aagctgccagcatgatcttaactttc 26
>45652_miR167:micropc
Length = 74
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactttc 26
|||||||||||||||||| |||||||
Sbjct: 3 aagctgccagcatgatctgaactttc 28
>45462_miR167:micropc
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactttc 26
|||||||||||||||||| |||||||
Sbjct: 3 aagctgccagcatgatcttaactttc 28
>45259_miR167:micropc
Length = 74
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactttc 26
|||||||||||||||||| |||||||
Sbjct: 3 aagctgccagcatgatctgaactttc 28
>44797_miR167:micropc
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactttc 26
|||||||||||||||||| |||||||
Sbjct: 3 aagctgccagcatgatcttaactttc 28
>46640_miR167:micropc
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaa 20
||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctaa 22
>46533_miR167:micropc
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactt 24
|||||||||||||||||| |||||
Sbjct: 1 aagctgccagcatgatcttaactt 24
>46190_miR167:micropc
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaa 20
||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctaa 22
>46170_miR167:micropc
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactt 24
|||||||||||||||||| |||||
Sbjct: 3 aagctgccagcatgatcttaactt 26
>46113_miR167:micropc
Length = 69
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 40 aaggaaagatcggatcatatggcagctt 67
||||||||||| |||||| |||||||||
Sbjct: 40 aaggaaagatcagatcatgtggcagctt 67
>46018_miR167:micropc
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaa 20
||||||||||||||||||||
Sbjct: 1 aagctgccagcatgatctaa 20
>45768_miR167:micropc
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaa 20
||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctaa 22
>45389_miR167:micropc
Length = 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactt 24
|||||||||||||||||| |||||
Sbjct: 1 aagctgccagcatgatcttaactt 24
>45329_miR167:micropc
Length = 69
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactt 24
|||||||||||||||||| |||||
Sbjct: 3 aagctgccagcatgatcttaactt 26
>45268_miR167:micropc
Length = 69
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 40 aaggaaagatcggatcatatggcagctt 67
||||||||||| |||||| |||||||||
Sbjct: 40 aaggaaagatcagatcatgtggcagctt 67
>44939_miR167:micropc
Length = 69
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctaaactt 24
|||||||||||||||||| |||||
Sbjct: 3 aagctgccagcatgatcttaactt 26
>46832_miR167:micropc
Length = 82
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatcta 19
|||||||||||||||||||
Sbjct: 3 aagctgccagcatgatcta 21
>46183_miR167:micropc
Length = 86
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatcta 19
|||||||||||||||||||
Sbjct: 1 aagctgccagcatgatcta 19
>45915_miR167:micropc
Length = 86
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatcta 19
|||||||||||||||||||
Sbjct: 1 aagctgccagcatgatcta 19
>45894_miR167:micropc
Length = 82
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatcta 19
|||||||||||||||||||
Sbjct: 3 aagctgccagcatgatcta 21
>45889_miR167:micropc
Length = 99
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatcta 19
|||||||||||||||||||
Sbjct: 3 aagctgccagcatgatcta 21
>45692_miR167:micropc
Length = 82
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatcta 19
|||||||||||||||||||
Sbjct: 3 aagctgccagcatgatcta 21
>45454_miR167:micropc
Length = 95
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatcta 19
|||||||||||||||||||
Sbjct: 1 aagctgccagcatgatcta 19
>45269_miR167:micropc
Length = 90
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatcta 19
|||||||||||||||||||
Sbjct: 3 aagctgccagcatgatcta 21
