miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46654_miR1030:micropc
          Length = 151

 Score =  285 bits (144), Expect = 5e-78
 Identities = 147/148 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaacaaaatcaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaacaaaatcaag 91

                                                                       
Query: 61  ttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaataa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90  ttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaataa 31

                                       
Query: 121 gcttagttgaggtgcaggtgcaagtgca 148
           |||||||||||||||||||||| |||||
Sbjct: 30  gcttagttgaggtgcaggtgcaggtgca 3




>45830_miR1030:micropc
          Length = 150

 Score =  285 bits (144), Expect = 5e-78
 Identities = 147/148 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaacaaaatcaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaacaaaatcaag 90

                                                                       
Query: 61  ttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaataa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89  ttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaataa 30

                                       
Query: 121 gcttagttgaggtgcaggtgcaagtgca 148
           |||||||||||||||||||||| |||||
Sbjct: 29  gcttagttgaggtgcaggtgcaggtgca 2




>45885_miR530:micropc
          Length = 135

 Score =  139 bits (70), Expect = 7e-34
 Identities = 128/149 (85%), Gaps = 15/149 (10%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactccacaaacaaaatcaa 59
           |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||
Sbjct: 1   tgcatttgcacctgcatcttattgcttttgttttgttcttgactccacaaacaaaatcaa 60

                                                                       
Query: 60  gttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaata 119
            ||||||||||||||||||||| ||||              |||| |||||||||| |||
Sbjct: 61  cttctgtcgatacagtatgtggtacaa--------------ttagctatggaaactcata 106

                                        
Query: 120 agcttagttgaggtgcaggtgcaagtgca 148
           |||||||||||||||||||||||||||||
Sbjct: 107 agcttagttgaggtgcaggtgcaagtgca 135




>45983_miR530:micropc
          Length = 138

 Score = 95.6 bits (48), Expect = 9e-21
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                           
Query: 101 ttagatatggaaactaataagcttagttgaggtgcaggtgcaagtgca 148
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91  ttagatatggaaactaataagcttagttgaggtgcaggtgcaagtgca 138




>45671_miR530:micropc
          Length = 138

 Score = 95.6 bits (48), Expect = 9e-21
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                           
Query: 101 ttagatatggaaactaataagcttagttgaggtgcaggtgcaagtgca 148
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91  ttagatatggaaactaataagcttagttgaggtgcaggtgcaagtgca 138




>46152_miR530:micropc
          Length = 134

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tgcatttgcacctgcatctt 20
          ||||||||||||||||||||
Sbjct: 1  tgcatttgcacctgcatctt 20




>45910_miR530:micropc
          Length = 134

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tgcatttgcacctgcatctt 20
          ||||||||||||||||||||
Sbjct: 1  tgcatttgcacctgcatctt 20