miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46820_miR167:micropc
Length = 96
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcacgatctaattaactttctttctccgtttgttttcatgacgatggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagctgccagcacgatctaattaactttctttctccgtttgttttcatgacgatggaa 60
Query: 61 agagatgagtgtagattagatcatgtttgcagtttc 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 agagatgagtgtagattagatcatgtttgcagtttc 96
>46540_miR167:micropc
Length = 96
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcacgatctaattaactttctttctccgtttgttttcatgacgatggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagctgccagcacgatctaattaactttctttctccgtttgttttcatgacgatggaa 60
Query: 61 agagatgagtgtagattagatcatgtttgcagtttc 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 agagatgagtgtagattagatcatgtttgcagtttc 96
>46640_miR167:micropc
Length = 101
Score = 73.8 bits (37), Expect = 2e-14
Identities = 87/100 (87%), Gaps = 4/100 (4%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcacgatctaattaactttctttctccgt--ttgt-tttcatgacgatg 57
|||||||||||||| |||||||||| |||||||| ||| | |||| |||||||||||||
Sbjct: 1 tgaagctgccagcatgatctaattagctttctttatcctttgttgtgtttcatgacgatg 60
Query: 58 g-aaagagatgagtgtagattagatcatgtttgcagtttc 96
| ||||||| ||| | |||||||||||||| ||||||||
Sbjct: 61 gttaagagatcagtctcgattagatcatgttcgcagtttc 100
>46190_miR167:micropc
Length = 101
Score = 73.8 bits (37), Expect = 2e-14
Identities = 87/100 (87%), Gaps = 4/100 (4%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcacgatctaattaactttctttctccgt--ttgt-tttcatgacgatg 57
|||||||||||||| |||||||||| |||||||| ||| | |||| |||||||||||||
Sbjct: 1 tgaagctgccagcatgatctaattagctttctttatcctttgttgtgtttcatgacgatg 60
Query: 58 g-aaagagatgagtgtagattagatcatgtttgcagtttc 96
| ||||||| ||| | |||||||||||||| ||||||||
Sbjct: 61 gttaagagatcagtctcgattagatcatgttcgcagtttc 100
>45768_miR167:micropc
Length = 101
Score = 73.8 bits (37), Expect = 2e-14
Identities = 87/100 (87%), Gaps = 4/100 (4%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcacgatctaattaactttctttctccgt--ttgt-tttcatgacgatg 57
|||||||||||||| |||||||||| |||||||| ||| | |||| |||||||||||||
Sbjct: 1 tgaagctgccagcatgatctaattagctttctttatcctttgttgtgtttcatgacgatg 60
Query: 58 g-aaagagatgagtgtagattagatcatgtttgcagtttc 96
| ||||||| ||| | |||||||||||||| ||||||||
Sbjct: 61 gttaagagatcagtctcgattagatcatgttcgcagtttc 100
>46018_miR167:micropc
Length = 97
Score = 67.9 bits (34), Expect = 1e-12
Identities = 84/97 (86%), Gaps = 4/97 (4%)
Strand = Plus / Plus
Query: 3 aagctgccagcacgatctaattaactttctttctccgt--ttgt-tttcatgacgatgg- 58
|||||||||||| |||||||||| |||||||| ||| | |||| ||||||||||||||
Sbjct: 1 aagctgccagcatgatctaattagctttctttatcctttgttgtgtttcatgacgatggt 60
Query: 59 aaagagatgagtgtagattagatcatgtttgcagttt 95
||||||| ||| | |||||||||||||| |||||||
Sbjct: 61 taagagatcagtctcgattagatcatgttcgcagttt 97
>45889_miR167:micropc
Length = 99
Score = 67.9 bits (34), Expect = 1e-12
Identities = 84/98 (85%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcacgatctaattaactttctttctccgtt-tgttttcatgacgatgg- 58
|||||||||||||| |||||| |||||||| |||||||||| | | | |||||| ||||
Sbjct: 1 tgaagctgccagcatgatctagttaactttatttctccgttgtttatccatgacaatgga 60
Query: 59 aaagagatgagtgtagattagatcatgtttgcagtttc 96
|||| ||| ||||| |||||||||||||| | ||||||
Sbjct: 61 aaagggataagtgtcgattagatcatgttcgtagtttc 98
>45454_miR167:micropc
Length = 95
Score = 61.9 bits (31), Expect = 8e-11
Identities = 75/87 (86%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 3 aagctgccagcacgatctaattaactttctttctccgtt-tgttttcatgacgatgg-aa 60
|||||||||||| |||||| |||||||| |||||||||| | | | |||||| |||| ||
Sbjct: 1 aagctgccagcatgatctagttaactttatttctccgttgtttatccatgacaatggaaa 60
Query: 61 agagatgagtgtagattagatcatgtt 87
|| ||| ||||| ||||||||||||||
Sbjct: 61 agggataagtgtcgattagatcatgtt 87
