miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45179_miR156:micropc
Length = 86
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggtcttttcctgcatatatcattttatgctcgaagctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 cagaagagagtgagcacccatggtcttttcctgcatatatcattttatgctcgaagctat 63
Query: 61 gtgtgctcactctctatctg 80
||||||||||||||||||||
Sbjct: 64 gtgtgctcactctctatctg 83
>44869_miR156:micropc
Length = 84
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggtcttttcctgcatatatcattttatgctcgaagctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 cagaagagagtgagcacccatggtcttttcctgcatatatcattttatgctcgaagctat 62
Query: 61 gtgtgctcactctctatctg 80
||||||||||||||||||||
Sbjct: 63 gtgtgctcactctctatctg 82
>46706_miR156:micropc
Length = 89
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggtcttt 28
||||||||||||||||||||||||||||
Sbjct: 4 cagaagagagtgagcacccatggtcttt 31
>46268_miR156:micropc
Length = 89
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggtcttt 28
||||||||||||||||||||||||||||
Sbjct: 4 cagaagagagtgagcacccatggtcttt 31
>46818_miR156:micropc
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||||||||||||| |||||||||
Sbjct: 61 atgctcgaagctatgcgtgctcact 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 3 cagaagagagtgagcacacatggt 26
>46719_miR156:micropc
Length = 98
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||||||||||||| |||||||||
Sbjct: 61 atgctcgaagctatgcgtgctcact 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 4 cagaagagagtgagcacacatggt 27
>46657_miR156:micropc
Length = 92
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||||||||||||| |||||||||
Sbjct: 58 atgctcgaagctatgcgtgctcact 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 1 cagaagagagtgagcacacatggt 24
>46602_miR156:micropc
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||||||||||||| |||||||||
Sbjct: 62 atgctcgaagctatgcgtgctcact 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 4 cagaagagagtgagcacacatggt 27
>46235_miR156:micropc
Length = 98
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||||||||||||| |||||||||
Sbjct: 61 atgctcgaagctatgcgtgctcact 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 4 cagaagagagtgagcacacatggt 27
>45704_miR156:micropc
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||||||||||||| |||||||||
Sbjct: 61 atgctcgaagctatgcgtgctcact 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 3 cagaagagagtgagcacacatggt 26
>45540_miR156:micropc
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||||||||||||| |||||||||
Sbjct: 61 atgctcgaagctatgcgtgctcact 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 3 cagaagagagtgagcacacatggt 26
>45154_miR156:micropc
Length = 96
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||||||||||||| |||||||||
Sbjct: 60 atgctcgaagctatgcgtgctcact 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 3 cagaagagagtgagcacacatggt 26
>45140_miR156:micropc
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||||||||||||| |||||||||
Sbjct: 62 atgctcgaagctatgcgtgctcact 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 4 cagaagagagtgagcacacatggt 27
>45058_miR156:micropc
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||||||||||||| |||||||||
Sbjct: 62 atgctcgaagctatgcgtgctcact 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 4 cagaagagagtgagcacacatggt 27
>44816_miR156:micropc
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||||||||||||| |||||||||
Sbjct: 62 atgctcgaagctatgcgtgctcact 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 4 cagaagagagtgagcacacatggt 27
>44786_miR156:micropc
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||||||||||||| |||||||||
Sbjct: 61 atgctcgaagctatgcgtgctcact 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 3 cagaagagagtgagcacacatggt 26
>46377_miR156:micropc
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 4 cagaagagagtgagcacacatggt 27
>45630_miR156:micropc
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 3 cagaagagagtgagcacacatggt 26
>45516_miR156:micropc
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 1 cagaagagagtgagcacacatggt 24
>45146_miR156:micropc
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 4 cagaagagagtgagcacacatggt 27
