miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>44947_miR393:micropc
Length = 89
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatctaatgactttcgatgtctatatgatgttaatgtttagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatctaatgactttcgatgtctatatgatgttaatgtttagtc 60
Query: 61 atttcattggatcatgcgatcccttagga 89
|||||||||||||||||||||||||||||
Sbjct: 61 atttcattggatcatgcgatcccttagga 89
>46496_miR393:micropc
Length = 89
Score = 129 bits (65), Expect = 4e-31
Identities = 83/89 (93%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatctaatgactttcgatgtctatatgatgttaatgtttagtc 60
||||||||||||||||||||||||||||| |||||||||| || || |||||||||||||
Sbjct: 1 tccaaagggatcgcattgatctaatgactctcgatgtctaaatcatattaatgtttagtc 60
Query: 61 atttcattggatcatgcgatcccttagga 89
|||| |||||||||||||||||||||||
Sbjct: 61 ttttcgttggatcatgcgatcccttagga 89
>45740_miR393:micropc
Length = 89
Score = 129 bits (65), Expect = 4e-31
Identities = 83/89 (93%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatctaatgactttcgatgtctatatgatgttaatgtttagtc 60
||||||||||||||||||||||||||||| |||||||||| || || |||||||||||||
Sbjct: 1 tccaaagggatcgcattgatctaatgactctcgatgtctaaatcatattaatgtttagtc 60
Query: 61 atttcattggatcatgcgatcccttagga 89
|||| |||||||||||||||||||||||
Sbjct: 61 ttttcgttggatcatgcgatcccttagga 89
>46633_miR393:micropc
Length = 89
Score = 121 bits (61), Expect = 9e-29
Identities = 82/89 (92%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatctaatgactttcgatgtctatatgatgttaatgtttagtc 60
||||||||||||||||||||||||||||| |||||||||| || || ||||||||||||
Sbjct: 1 tccaaagggatcgcattgatctaatgactctcgatgtctaaatcatattaatgtttagtt 60
Query: 61 atttcattggatcatgcgatcccttagga 89
|||| |||||||||||||||||||||||
Sbjct: 61 ttttcgttggatcatgcgatcccttagga 89
>45020_miR393:micropc
Length = 89
Score = 121 bits (61), Expect = 9e-29
Identities = 82/89 (92%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatctaatgactttcgatgtctatatgatgttaatgtttagtc 60
||||||||||||||||||||||||||||| |||||||||| || || ||||||||||||
Sbjct: 1 tccaaagggatcgcattgatctaatgactctcgatgtctaaatcatattaatgtttagtt 60
Query: 61 atttcattggatcatgcgatcccttagga 89
|||| |||||||||||||||||||||||
Sbjct: 61 ttttcgttggatcatgcgatcccttagga 89
>46785_miR393:micropc
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatct 22
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatct 22
>46578_miR393:micropc
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatct 22
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatct 22
>46145_miR393:micropc
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatct 22
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatct 22
>45563_miR393:micropc
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatct 22
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatct 22
>45326_miR393:micropc
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatct 22
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatct 22
>46694_miR393:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>46564_miR393:micropc
Length = 66
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>46013_miR393:micropc
Length = 129
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>45858_miR393:micropc
Length = 74
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>45495_miR393:micropc
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>45377_miR393:micropc
Length = 74
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>45319_miR393:micropc
Length = 66
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>45076_miR393:micropc
Length = 129
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>44959_miR393:micropc
Length = 95
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>44849_miR393:micropc
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>44833_miR393:micropc
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
