miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46663_miR168:micropc
Length = 88
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaacctgtttttgcgcgaaatggtggagtggttgccggcggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaacctgtttttgcgcgaaatggtggagtggttgccggcggc 60
Query: 61 gaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||
Sbjct: 61 gaattggatcccgccttgcatcaactga 88
>46427_miR168:micropc
Length = 88
Score = 143 bits (72), Expect = 2e-35
Identities = 84/88 (95%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaacctgtttttgcgcgaaatggtggagtggttgccggcggc 60
||||||||||||||||||||||| |||| |||||||||||||| |||||| |||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaaccggtttctgcgcgaaatggtgaagtggtagccggcggc 60
Query: 61 gaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||
Sbjct: 61 gaattggatcccgccttgcatcaactga 88
>46189_miR168:micropc
Length = 88
Score = 143 bits (72), Expect = 2e-35
Identities = 84/88 (95%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaacctgtttttgcgcgaaatggtggagtggttgccggcggc 60
||||||||||||||||||||||| |||| |||||||||||||| |||||| |||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaaccggtttctgcgcgaaatggtgaagtggtagccggcggc 60
Query: 61 gaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||
Sbjct: 61 gaattggatcccgccttgcatcaactga 88
>46636_miR168:micropc
Length = 141
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 gcgaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||||
Sbjct: 112 gcgaattggatcccgccttgcatcaactga 141
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>46343_miR168:micropc
Length = 144
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 gcgaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||||
Sbjct: 115 gcgaattggatcccgccttgcatcaactga 144
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>46278_miR168:micropc
Length = 138
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 gcgaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||||
Sbjct: 109 gcgaattggatcccgccttgcatcaactga 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>45952_miR168:micropc
Length = 155
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 gcgaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||||
Sbjct: 126 gcgaattggatcccgccttgcatcaactga 155
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>45700_miR168:micropc
Length = 155
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 gcgaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||||
Sbjct: 126 gcgaattggatcccgccttgcatcaactga 155
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>45425_miR168:micropc
Length = 141
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 gcgaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||||
Sbjct: 112 gcgaattggatcccgccttgcatcaactga 141
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>45228_miR168:micropc
Length = 141
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 gcgaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||||
Sbjct: 112 gcgaattggatcccgccttgcatcaactga 141
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaacc 23
|||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaacc 23
>45119_miR168:micropc
Length = 144
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 gcgaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||||
Sbjct: 115 gcgaattggatcccgccttgcatcaactga 144
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>44989_miR168:micropc
Length = 138
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 gcgaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||||
Sbjct: 109 gcgaattggatcccgccttgcatcaactga 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>44967_miR168:micropc
Length = 141
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 gcgaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||||
Sbjct: 112 gcgaattggatcccgccttgcatcaactga 141
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaacc 23
|||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaacc 23
>46333_miR168:micropc
Length = 118
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 61 gaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||
Sbjct: 91 gaattggatcccgccttgcatcaactga 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>45406_miR168:micropc
Length = 118
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 61 gaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||
Sbjct: 91 gaattggatcccgccttgcatcaactga 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>45088_miR168:micropc
Length = 118
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 61 gaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||
Sbjct: 91 gaattggatcccgccttgcatcaactga 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>44951_miR168:micropc
Length = 118
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 61 gaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||
Sbjct: 91 gaattggatcccgccttgcatcaactga 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>46038_miR168:micropc
Length = 104
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 attggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||
Sbjct: 79 attggatcccgccttgcatcaactga 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaacc 23
|||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaacc 23
>45956_miR168:micropc
Length = 100
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 attggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||
Sbjct: 75 attggatcccgccttgcatcaactga 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>45301_miR168:micropc
Length = 104
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 attggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||
Sbjct: 79 attggatcccgccttgcatcaactga 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaacc 23
|||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaacc 23
>44865_miR168:micropc
Length = 100
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 attggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||
Sbjct: 75 attggatcccgccttgcatcaactga 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>46522_miR168:micropc
Length = 110
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaacc 23
|||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaacc 23
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 gatcccgccttgcatcaactga 88
||||||||||||||||||||||
Sbjct: 89 gatcccgccttgcatcaactga 110
>46406_miR168:micropc
Length = 110
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaacc 23
|||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaacc 23
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 gatcccgccttgcatcaactga 88
||||||||||||||||||||||
Sbjct: 89 gatcccgccttgcatcaactga 110
>46717_miR168:micropc
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 tcccgccttgcatcaactga 88
||||||||||||||||||||
Sbjct: 77 tcccgccttgcatcaactga 96
>46366_miR168:micropc
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 tcccgccttgcatcaactga 88
||||||||||||||||||||
Sbjct: 77 tcccgccttgcatcaactga 96
>46098_miR168:micropc
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 tcccgccttgcatcaactga 88
||||||||||||||||||||
Sbjct: 82 tcccgccttgcatcaactga 101
>45758_miR168:micropc
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 tcccgccttgcatcaactga 88
||||||||||||||||||||
Sbjct: 82 tcccgccttgcatcaactga 101
>46209_miR168:micropc
Length = 133
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 64 ttggatcccgccttgcatcaactga 88
|||| ||||||||||||||||||||
Sbjct: 109 ttgggtcccgccttgcatcaactga 133
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>45664_miR168:micropc
Length = 133
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 64 ttggatcccgccttgcatcaactga 88
|||| ||||||||||||||||||||
Sbjct: 109 ttgggtcccgccttgcatcaactga 133
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>45247_miR168:micropc
Length = 134
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 64 ttggatcccgccttgcatcaactga 88
|||| ||||||||||||||||||||
Sbjct: 110 ttgggtcccgccttgcatcaactga 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>44885_miR168:micropc
Length = 134
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 64 ttggatcccgccttgcatcaactga 88
|||| ||||||||||||||||||||
Sbjct: 110 ttgggtcccgccttgcatcaactga 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>46666_miR168:micropc
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 tcccgccttgcatcaactga 88
||||||||||||||||||||
Sbjct: 106 tcccgccttgcatcaactga 125
>46411_miR168:micropc
Length = 145
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>46016_miR168:micropc
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 tcccgccttgcatcaactga 88
||||||||||||||||||||
Sbjct: 106 tcccgccttgcatcaactga 125
>45240_miR168:micropc
Length = 145
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
