miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46763_miR164:micropc
Length = 102
Score = 202 bits (102), Expect = 4e-53
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcattactaactcaccaaccataaaaaacactgacacataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactcaccaaccataaaaaacactgacacataaa 60
Query: 61 ttcaattgattgagttagttcttcatgtgcccctcttcccca 102
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcaattgattgagttagttcttcatgtgcccctcttcccca 102
>46647_miR164:micropc
Length = 168
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcattactaactca 32
||||||||||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactca 32
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 70 ttgagttagttcttcatgtgcccctcttcccca 102
|||||||| |||||||||||||| |||||||||
Sbjct: 136 ttgagttatttcttcatgtgcccttcttcccca 168
>46639_miR164:micropc
Length = 168
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcattactaactca 32
||||||||||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactca 32
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 70 ttgagttagttcttcatgtgcccctcttcccca 102
|||||||| |||||||||||||| |||||||||
Sbjct: 136 ttgagttatttcttcatgtgcccttcttcccca 168
>46445_miR164:micropc
Length = 168
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcattactaactca 32
||||||||||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactca 32
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 70 ttgagttagttcttcatgtgcccctcttcccca 102
|||||||| |||||||||||||| |||||||||
Sbjct: 136 ttgagttatttcttcatgtgcccttcttcccca 168
>46101_miR164:micropc
Length = 137
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcattactaactca 32
||||||||||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactca 32
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 71 tgagttagttcttcatgtgcccctcttcccca 102
||||||||||||||||||||| |||||||||
Sbjct: 106 tgagttagttcttcatgtgcctgtcttcccca 137
>46047_miR164:micropc
Length = 137
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcattactaactca 32
||||||||||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactca 32
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 71 tgagttagttcttcatgtgcccctcttcccca 102
||||||||||||||||||||| |||||||||
Sbjct: 106 tgagttagttcttcatgtgcctgtcttcccca 137
>45465_miR164:micropc
Length = 168
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcattactaactca 32
||||||||||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactca 32
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 70 ttgagttagttcttcatgtgcccctcttcccca 102
|||||||| |||||||||||||| |||||||||
Sbjct: 136 ttgagttatttcttcatgtgcccttcttcccca 168
>45324_miR164:micropc
Length = 168
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcattactaactca 32
||||||||||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactca 32
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 70 ttgagttagttcttcatgtgcccctcttcccca 102
|||||||| |||||||||||||| |||||||||
Sbjct: 136 ttgagttatttcttcatgtgcccttcttcccca 168
>44832_miR164:micropc
Length = 168
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcattactaactca 32
||||||||||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactca 32
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 70 ttgagttagttcttcatgtgcccctcttcccca 102
|||||||| |||||||||||||| |||||||||
Sbjct: 136 ttgagttatttcttcatgtgcccttcttcccca 168
>45579_miR164:micropc
Length = 196
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcattactaactca 32
||||||||||||||||||| ||||||||||||
Sbjct: 1 tggagaagcagggcacgtgtattactaactca 32
>45452_miR164:micropc
Length = 146
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 71 tgagttagttcttcatgtgcccctcttcccca 102
||||||||| ||||||||||||||||||||||
Sbjct: 115 tgagttagtccttcatgtgcccctcttcccca 146
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcattactaactcaccaac 37
||||||||||||||||||||| | |||||||| ||||
Sbjct: 1 tggagaagcagggcacgtgcaattctaactcatcaac 37
>44812_miR164:micropc
Length = 146
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 71 tgagttagttcttcatgtgcccctcttcccca 102
||||||||| ||||||||||||||||||||||
Sbjct: 115 tgagttagtccttcatgtgcccctcttcccca 146
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcattactaactcaccaac 37
||||||||||||||||||||| | |||||||| ||||
Sbjct: 1 tggagaagcagggcacgtgcaattctaactcatcaac 37
>45892_miR164:micropc
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcattac 25
|||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcattac 25
>45686_miR164:micropc
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcattac 25
|||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcattac 25
>45583_miR164:micropc
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcattac 25
|||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcattac 25
>45738_miR164:micropc
Length = 152
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcat 22
||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcat 22
>45287_miR164:micropc
Length = 152
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcat 22
||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcat 22
>45052_miR164:micropc
Length = 152
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcat 22
||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcat 22
