miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45779_miR390:micropc
          Length = 96

 Score =  190 bits (96), Expect = 1e-49
 Identities = 96/96 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  aagctcaggagggatagcgccatggatgatccatctttcaagctttcatgcatgtatgtt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  aagctcaggagggatagcgccatggatgatccatctttcaagctttcatgcatgtatgtt 60

                                              
Query: 61 atttgatcctcatatagcgctatccatcctgagttt 96
          ||||||||||||||||||||||||||||||||||||
Sbjct: 61 atttgatcctcatatagcgctatccatcctgagttt 96




>45362_miR390:micropc
          Length = 97

 Score =  190 bits (96), Expect = 1e-49
 Identities = 96/96 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  aagctcaggagggatagcgccatggatgatccatctttcaagctttcatgcatgtatgtt 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  aagctcaggagggatagcgccatggatgatccatctttcaagctttcatgcatgtatgtt 60

                                              
Query: 61 atttgatcctcatatagcgctatccatcctgagttt 96
          ||||||||||||||||||||||||||||||||||||
Sbjct: 61 atttgatcctcatatagcgctatccatcctgagttt 96




>45647_miR390:micropc
          Length = 94

 Score =  186 bits (94), Expect = 2e-48
 Identities = 94/94 (100%)
 Strand = Plus / Plus

                                                                      
Query: 2  agctcaggagggatagcgccatggatgatccatctttcaagctttcatgcatgtatgtta 61
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  agctcaggagggatagcgccatggatgatccatctttcaagctttcatgcatgtatgtta 60

                                            
Query: 62 tttgatcctcatatagcgctatccatcctgagtt 95
          ||||||||||||||||||||||||||||||||||
Sbjct: 61 tttgatcctcatatagcgctatccatcctgagtt 94




>46582_miR390:micropc
          Length = 72

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 1  aagctcaggagggatagcgccatgg 25
          |||||||||||||||||||||||||
Sbjct: 1  aagctcaggagggatagcgccatgg 25




>46339_miR390:micropc
          Length = 71

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 1  aagctcaggagggatagcgccatgg 25
          |||||||||||||||||||||||||
Sbjct: 1  aagctcaggagggatagcgccatgg 25



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 77 gcgctatccatcctgagttt 96
          ||||||||||||||||||||
Sbjct: 52 gcgctatccatcctgagttt 71




>46099_miR390:micropc
          Length = 97

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 1  aagctcaggagggatagcgccatgg 25
          |||||||||||||||||||||||||
Sbjct: 1  aagctcaggagggatagcgccatgg 25



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 77 gcgctatccatcctgagttt 96
          ||||||||||||||||||||
Sbjct: 78 gcgctatccatcctgagttt 97




>45789_miR390:micropc
          Length = 97

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 1  aagctcaggagggatagcgccatgg 25
          |||||||||||||||||||||||||
Sbjct: 1  aagctcaggagggatagcgccatgg 25



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 77 gcgctatccatcctgagttt 96
          ||||||||||||||||||||
Sbjct: 78 gcgctatccatcctgagttt 97




>45682_miR390:micropc
          Length = 71

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 1  aagctcaggagggatagcgccatgg 25
          |||||||||||||||||||||||||
Sbjct: 1  aagctcaggagggatagcgccatgg 25



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 77 gcgctatccatcctgagttt 96
          ||||||||||||||||||||
Sbjct: 52 gcgctatccatcctgagttt 71




>45123_miR390:micropc
          Length = 72

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 1  aagctcaggagggatagcgccatgg 25
          |||||||||||||||||||||||||
Sbjct: 1  aagctcaggagggatagcgccatgg 25



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 77 gcgctatccatcctgagttt 96
          ||||||||||||||||||||
Sbjct: 52 gcgctatccatcctgagttt 71




>44966_miR390:micropc
          Length = 98

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 1  aagctcaggagggatagcgccatgg 25
          |||||||||||||||||||||||||
Sbjct: 1  aagctcaggagggatagcgccatgg 25



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 77 gcgctatccatcctgagttt 96
          ||||||||||||||||||||
Sbjct: 78 gcgctatccatcctgagttt 97




>46796_miR390:micropc
          Length = 95

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 2  agctcaggagggatagcgccatgg 25
          ||||||||||||||||||||||||
Sbjct: 1  agctcaggagggatagcgccatgg 24




>45151_miR390:micropc
          Length = 69

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 2  agctcaggagggatagcgccatgg 25
          ||||||||||||||||||||||||
Sbjct: 1  agctcaggagggatagcgccatgg 24




>45612_miR390:micropc
          Length = 88

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  aagctcaggagggatagcgccatgga 26
          |||||||||||||||||| |||||||
Sbjct: 1  aagctcaggagggatagcaccatgga 26



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 77 gcgctatccatcctgagttt 96
          ||||||||||||||||||||
Sbjct: 68 gcgctatccatcctgagttt 87




>44796_miR390:micropc
          Length = 87

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  aagctcaggagggatagcgccatgga 26
          |||||||||||||||||| |||||||
Sbjct: 1  aagctcaggagggatagcaccatgga 26



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 77 gcgctatccatcctgagttt 96
          ||||||||||||||||||||
Sbjct: 68 gcgctatccatcctgagttt 87




>45827_miR390:micropc
          Length = 55

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 1  aagctcaggagggatagcgcc 21




>45719_miR390:micropc
          Length = 55

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  aagctcaggagggatagcgcc 21
          |||||||||||||||||||||
Sbjct: 1  aagctcaggagggatagcgcc 21




>45763_miR390:micropc
          Length = 54

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 2  agctcaggagggatagcgcc 21
          ||||||||||||||||||||
Sbjct: 1  agctcaggagggatagcgcc 20




>45599_miR390:micropc
          Length = 68

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  aagctcaggagggatagcgccatg 24
          |||||||||||||||||| |||||
Sbjct: 1  aagctcaggagggatagcaccatg 24



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 73 tatagcgctatccatcctgagttt 96
          |||||||||||||||| |||||||
Sbjct: 45 tatagcgctatccatcttgagttt 68




>45502_miR390:micropc
          Length = 68

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  aagctcaggagggatagcgccatg 24
          |||||||||||||||||| |||||
Sbjct: 1  aagctcaggagggatagcaccatg 24



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 73 tatagcgctatccatcctgagttt 96
          |||||||||||||||| |||||||
Sbjct: 45 tatagcgctatccatcttgagttt 68




>45082_miR390:micropc
          Length = 68

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  aagctcaggagggatagcgccatg 24
          |||||||||||||||||| |||||
Sbjct: 1  aagctcaggagggatagcaccatg 24



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 73 tatagcgctatccatcctgagttt 96
          |||||||||||||||| |||||||
Sbjct: 45 tatagcgctatccatcttgagttt 68