miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46257_miR171:micropc
Length = 83
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 atattggcctggttcattcagatcttcccgaccaaaccacgcaacaactctcttagatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atattggcctggttcattcagatcttcccgaccaaaccacgcaacaactctcttagatat 61
Query: 61 ctgattgagccgcgtcaatat 81
|||||||||||||||||||||
Sbjct: 62 ctgattgagccgcgtcaatat 82
>45171_miR171:micropc
Length = 83
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 atattggcctggttcattcagatcttcccgaccaaaccacgcaacaactctcttagatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atattggcctggttcattcagatcttcccgaccaaaccacgcaacaactctcttagatat 61
Query: 61 ctgattgagccgcgtcaatat 81
|||||||||||||||||||||
Sbjct: 62 ctgattgagccgcgtcaatat 82
>44859_miR171:micropc
Length = 84
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 atattggcctggttcattcagatcttcccgaccaaaccacgcaacaactctcttagatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atattggcctggttcattcagatcttcccgaccaaaccacgcaacaactctcttagatat 61
Query: 61 ctgattgagccgcgtcaatat 81
|||||||||||||||||||||
Sbjct: 62 ctgattgagccgcgtcaatat 82
>46684_miR171:micropc
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgattgagccgcgtcaatat 81
||||||||||||||||||||
Sbjct: 59 tgattgagccgcgtcaatat 78
>46553_miR171:micropc
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgattgagccgcgtcaatat 81
||||||||||||||||||||
Sbjct: 61 tgattgagccgcgtcaatat 80
>46163_miR171:micropc
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgattgagccgcgtcaatat 81
||||||||||||||||||||
Sbjct: 62 tgattgagccgcgtcaatat 81
>45662_miR171:micropc
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgattgagccgcgtcaatat 81
||||||||||||||||||||
Sbjct: 59 tgattgagccgcgtcaatat 78
>45361_miR171:micropc
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgattgagccgcgtcaatat 81
||||||||||||||||||||
Sbjct: 59 tgattgagccgcgtcaatat 78
>45337_miR171:micropc
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgattgagccgcgtcaatat 81
||||||||||||||||||||
Sbjct: 60 tgattgagccgcgtcaatat 79
>45160_miR171:micropc
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgattgagccgcgtcaatat 81
||||||||||||||||||||
Sbjct: 61 tgattgagccgcgtcaatat 80
>45955_miR171:micropc
Length = 98
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgtcaatat 81
|||||||||||||||||||
Sbjct: 80 gattgagccgcgtcaatat 98
>45488_miR171:micropc
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgtcaatat 81
|||||||||||||||||||
Sbjct: 81 gattgagccgcgtcaatat 99
>44972_miR171:micropc
Length = 102
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgtcaatat 81
|||||||||||||||||||
Sbjct: 82 gattgagccgcgtcaatat 100
>44829_miR171:micropc
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 63 gattgagccgcgtcaatat 81
|||||||||||||||||||
Sbjct: 81 gattgagccgcgtcaatat 99
