miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46718_miR157:micropc
Length = 84
Score = 155 bits (78), Expect = 5e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgattttggagttgaaattaatcaaattcactccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatgattttggagttgaaattaatcaaattcactccttt 63
Query: 61 gtgctctctatgcttctg 78
||||||||||||||||||
Sbjct: 64 gtgctctctatgcttctg 81
>45409_miR157:micropc
Length = 85
Score = 155 bits (78), Expect = 5e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgattttggagttgaaattaatcaaattcactccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatgatgattttggagttgaaattaatcaaattcactccttt 64
Query: 61 gtgctctctatgcttctg 78
||||||||||||||||||
Sbjct: 65 gtgctctctatgcttctg 82
>46830_miR157:micropc
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctctatgcttctg 78
||||||||||||||||||||||||||||
Sbjct: 51 tcactcctttgtgctctctatgcttctg 78
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatg 26
>46821_miR157:micropc
Length = 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctctatgcttctg 78
||||||||||||||||||||||||||||
Sbjct: 54 tcactcctttgtgctctctatgcttctg 81
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
|||||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatgat 30
>46687_miR156:micropc
Length = 74
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctctatgcttctg 78
||||||||||||||||||||||||||||
Sbjct: 47 tcactcctttgtgctctctatgcttctg 74
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatg 22
>46542_miR157:micropc
Length = 82
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctctatgcttctg 78
||||||||||||||||||||||||||||
Sbjct: 52 tcactcctttgtgctctctatgcttctg 79
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatg 26
>46407_miR156:micropc
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctctatgcttctg 78
||||||||||||||||||||||||||||
Sbjct: 48 tcactcctttgtgctctctatgcttctg 75
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatg 22
>45538_miR157:micropc
Length = 85
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctctatgcttctg 78
||||||||||||||||||||||||||||
Sbjct: 55 tcactcctttgtgctctctatgcttctg 82
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
|||||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatgatgat 31
>45460_miR157:micropc
Length = 81
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctctatgcttctg 78
||||||||||||||||||||||||||||
Sbjct: 51 tcactcctttgtgctctctatgcttctg 78
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatg 25
>45004_miR156:micropc
Length = 78
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctctatgcttctg 78
||||||||||||||||||||||||||||
Sbjct: 51 tcactcctttgtgctctctatgcttctg 78
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
|||||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatgat 27
>44822_miR157:micropc
Length = 80
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctctatgcttctg 78
||||||||||||||||||||||||||||
Sbjct: 50 tcactcctttgtgctctctatgcttctg 77
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatg 25
>46595_miR157:micropc
Length = 84
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 48 aattcactcctttgtgctctctatgcttctg 78
|||||||||||| ||||||||||||||||||
Sbjct: 51 aattcactccttcgtgctctctatgcttctg 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacaga 20
||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacaga 23
>46488_miR156:micropc
Length = 78
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 48 aattcactcctttgtgctctctatgcttctg 78
|||||||||||| ||||||||||||||||||
Sbjct: 48 aattcactccttcgtgctctctatgcttctg 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacaga 20
||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacaga 20
>46391_miR157:micropc
Length = 129
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
|||||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatgat 30
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 58 tttgtgctctctatgcttc 76
|||||||||||||||||||
Sbjct: 106 tttgtgctctctatgcttc 124
>46332_miR157:micropc
Length = 162
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
|||||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatgatgat 31
Score = 44.1 bits (22), Expect = 1e-05
Identities = 29/30 (96%), Gaps = 1/30 (3%)
Strand = Plus / Plus
Query: 50 ttcactcc-tttgtgctctctatgcttctg 78
|||||||| |||||||||||||||||||||
Sbjct: 130 ttcactccatttgtgctctctatgcttctg 159
>45959_miR157:micropc
Length = 161
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
|||||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatgat 30
Score = 44.1 bits (22), Expect = 1e-05
Identities = 29/30 (96%), Gaps = 1/30 (3%)
Strand = Plus / Plus
Query: 50 ttcactcc-tttgtgctctctatgcttctg 78
|||||||| |||||||||||||||||||||
Sbjct: 129 ttcactccatttgtgctctctatgcttctg 158
>45911_miR157:micropc
Length = 130
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
|||||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatgatgat 31
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 58 tttgtgctctctatgcttc 76
|||||||||||||||||||
Sbjct: 107 tttgtgctctctatgcttc 125
>45877_miR156:micropc
Length = 123
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
|||||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatgat 27
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 58 tttgtgctctctatgcttc 76
|||||||||||||||||||
Sbjct: 103 tttgtgctctctatgcttc 121
>45574_miR157:micropc
Length = 85
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 48 aattcactcctttgtgctctctatgcttctg 78
|||||||||||| ||||||||||||||||||
Sbjct: 52 aattcactccttcgtgctctctatgcttctg 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacaga 20
||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacaga 24
>45352_miR156:micropc
Length = 155
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
|||||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatgat 27
Score = 44.1 bits (22), Expect = 1e-05
Identities = 29/30 (96%), Gaps = 1/30 (3%)
Strand = Plus / Plus
Query: 50 ttcactcc-tttgtgctctctatgcttctg 78
|||||||| |||||||||||||||||||||
Sbjct: 126 ttcactccatttgtgctctctatgcttctg 155
>46032_miR156:micropc
Length = 77
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatga 26
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 54 ctcctttgtgctctctatgcttctg 78
|||||||||||||||||| ||||||
Sbjct: 53 ctcctttgtgctctctattcttctg 77
>45944_miR157:micropc
Length = 136
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatga 29
>45761_miR157:micropc
Length = 83
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatga 29
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 54 ctcctttgtgctctctatgcttctg 78
|||||||||||||||||| ||||||
Sbjct: 56 ctcctttgtgctctctattcttctg 80
>44820_miR157:micropc
Length = 137
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatgatga 30
>45936_miR157:micropc
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatg 28
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 cactcctttgtgctctctatgcttctg 78
|||||||||||||||| ||||||||||
Sbjct: 62 cactcctttgtgctctttatgcttctg 88
>45840_miR156:micropc
Length = 85
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatg 25
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 cactcctttgtgctctctatgcttctg 78
|||||||||||||||| ||||||||||
Sbjct: 59 cactcctttgtgctctttatgcttctg 85
>45457_miR156:micropc
Length = 85
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatg 25
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 cactcctttgtgctctctatgcttctg 78
|||||||||||||||| ||||||||||
Sbjct: 59 cactcctttgtgctctttatgcttctg 85
>45172_miR157:micropc
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatg 28
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 cactcctttgtgctctctatgcttctg 78
|||||||||||||||| ||||||||||
Sbjct: 62 cactcctttgtgctctttatgcttctg 88
>45152_miR157:micropc
Length = 92
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatgatg 29
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 cactcctttgtgctctctatgcttctg 78
|||||||||||||||| ||||||||||
Sbjct: 63 cactcctttgtgctctttatgcttctg 89
>44919_miR157:micropc
Length = 92
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatgatg 29
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 cactcctttgtgctctctatgcttctg 78
|||||||||||||||| ||||||||||
Sbjct: 63 cactcctttgtgctctttatgcttctg 89
>46572_miR157:micropc
Length = 83
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||| ||||||||
Sbjct: 4 cagaagatagagagcactgatgatga 29
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctcta 70
||||||||||||||||||||
Sbjct: 53 tcactcctttgtgctctcta 72
>44931_miR157:micropc
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||| ||||||||
Sbjct: 5 cagaagatagagagcactgatgatga 30
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctcta 70
||||||||||||||||||||
Sbjct: 54 tcactcctttgtgctctcta 73
>44856_miR156:micropc
Length = 77
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||| ||||||||
Sbjct: 1 cagaagatagagagcactgatgatga 26
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctcta 70
||||||||||||||||||||
Sbjct: 50 tcactcctttgtgctctcta 69
>46518_miR156:micropc
Length = 92
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tttgtgctctctatgcttctg 78
|||||||||||||||||||||
Sbjct: 72 tttgtgctctctatgcttctg 92
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
||||||||||||||||| ||||||||
Sbjct: 1 cagaagatagagagcactaatgatgat 27
>46149_miR156:micropc
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tttgtgctctctatgcttctg 78
|||||||||||||||||||||
Sbjct: 63 tttgtgctctctatgcttctg 83
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
||||||||||||||||| ||||||||
Sbjct: 1 cagaagatagagagcactaatgatgat 27
>46100_miR157:micropc
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tttgtgctctctatgcttctg 78
|||||||||||||||||||||
Sbjct: 66 tttgtgctctctatgcttctg 86
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
||||||||||||||||| ||||||||
Sbjct: 4 cagaagatagagagcactaatgatgat 30
>45968_miR157:micropc
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tttgtgctctctatgcttctg 78
|||||||||||||||||||||
Sbjct: 67 tttgtgctctctatgcttctg 87
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
||||||||||||||||| ||||||||
Sbjct: 5 cagaagatagagagcactaatgatgat 31
>45009_miR157:micropc
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tttgtgctctctatgcttctg 78
|||||||||||||||||||||
Sbjct: 76 tttgtgctctctatgcttctg 96
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
||||||||||||||||| ||||||||
Sbjct: 5 cagaagatagagagcactaatgatgat 31
>44895_miR157:micropc
Length = 98
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tttgtgctctctatgcttctg 78
|||||||||||||||||||||
Sbjct: 75 tttgtgctctctatgcttctg 95
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
||||||||||||||||| ||||||||
Sbjct: 4 cagaagatagagagcactaatgatgat 30
>46109_miR157:micropc
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctctatgcttctg 78
|||||||||||| |||||||| ||||||
Sbjct: 48 tcactcctttgtactctctatacttctg 75
>45887_miR157:micropc
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctctatgcttctg 78
|||||||||||| |||||||| ||||||
Sbjct: 49 tcactcctttgtactctctatacttctg 76
>44901_miR156:micropc
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctctatgcttctg 78
|||||||||||| |||||||| ||||||
Sbjct: 45 tcactcctttgtactctctatacttctg 72
