miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46239_miR166:micropc
Length = 148
Score = 202 bits (102), Expect = 5e-53
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 47 atcttcctcccctcggtcgatccctccatgatcagatcaaagatccgatgaggggggaga 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atcttcctcccctcggtcgatccctccatgatcagatcaaagatccgatgaggggggaga 106
Query: 107 ggagagtgaacgtgcgtagatctcggaccaggcttcattccc 148
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 ggagagtgaacgtgcgtagatctcggaccaggcttcattccc 148
>45546_miR166:micropc
Length = 148
Score = 202 bits (102), Expect = 5e-53
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 47 atcttcctcccctcggtcgatccctccatgatcagatcaaagatccgatgaggggggaga 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atcttcctcccctcggtcgatccctccatgatcagatcaaagatccgatgaggggggaga 106
Query: 107 ggagagtgaacgtgcgtagatctcggaccaggcttcattccc 148
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 ggagagtgaacgtgcgtagatctcggaccaggcttcattccc 148
>46660_miR166:micropc
Length = 146
Score = 200 bits (101), Expect = 2e-52
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 47 atcttcctcccctcggtcgatccctccatgatcagatcaaagatccgatgaggggggaga 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atcttcctcccctcggtcgatccctccatgatcagatcaaagatccgatgaggggggaga 105
Query: 107 ggagagtgaacgtgcgtagatctcggaccaggcttcattcc 147
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 ggagagtgaacgtgcgtagatctcggaccaggcttcattcc 146
>45482_miR166:micropc
Length = 146
Score = 200 bits (101), Expect = 2e-52
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 47 atcttcctcccctcggtcgatccctccatgatcagatcaaagatccgatgaggggggaga 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atcttcctcccctcggtcgatccctccatgatcagatcaaagatccgatgaggggggaga 105
Query: 107 ggagagtgaacgtgcgtagatctcggaccaggcttcattcc 147
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 ggagagtgaacgtgcgtagatctcggaccaggcttcattcc 146
>44983_miR166:micropc
Length = 146
Score = 200 bits (101), Expect = 2e-52
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 47 atcttcctcccctcggtcgatccctccatgatcagatcaaagatccgatgaggggggaga 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atcttcctcccctcggtcgatccctccatgatcagatcaaagatccgatgaggggggaga 105
Query: 107 ggagagtgaacgtgcgtagatctcggaccaggcttcattcc 147
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 ggagagtgaacgtgcgtagatctcggaccaggcttcattcc 146
>45504_miR166:micropc
Length = 170
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 122 gtagatctcggaccaggcttcattccc 148
|||||||||||||||||||||||||||
Sbjct: 143 gtagatctcggaccaggcttcattccc 169
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgggg 22
||||||||||||||||||||||
Sbjct: 2 gggaatgttgtctggctcgggg 23
>45033_miR166:micropc
Length = 170
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 122 gtagatctcggaccaggcttcattccc 148
|||||||||||||||||||||||||||
Sbjct: 143 gtagatctcggaccaggcttcattccc 169
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gggaatgttgtctggctcgggg 22
||||||||||||||||||||||
Sbjct: 2 gggaatgttgtctggctcgggg 23
>46652_miR166:micropc
Length = 105
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 124 agatctcggaccaggcttcattccc 148
|||||||||||||||||||||||||
Sbjct: 81 agatctcggaccaggcttcattccc 105
>45850_miR166:micropc
Length = 105
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 124 agatctcggaccaggcttcattccc 148
|||||||||||||||||||||||||
Sbjct: 81 agatctcggaccaggcttcattccc 105
>46839_miR166:micropc
Length = 85
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattccc 148
||||||||||||||||||||||||
Sbjct: 62 gatctcggaccaggcttcattccc 85
>46782_miR166:micropc
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattccc 148
||||||||||||||||||||||||
Sbjct: 85 gatctcggaccaggcttcattccc 108
>46766_miR166:micropc
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattccc 148
||||||||||||||||||||||||
Sbjct: 85 gatctcggaccaggcttcattccc 108
>46731_miR166:micropc
Length = 85
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattccc 148
||||||||||||||||||||||||
Sbjct: 62 gatctcggaccaggcttcattccc 85
>46618_miR166:micropc
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattccc 148
||||||||||||||||||||||||
Sbjct: 85 gatctcggaccaggcttcattccc 108
>46613_miR166:micropc
Length = 112
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 124 agatctcggaccaggcttcattcc 147
||||||||||||||||||||||||
Sbjct: 89 agatctcggaccaggcttcattcc 112
>46289_miR166:micropc
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattccc 148
||||||||||||||||||||||||
Sbjct: 85 gatctcggaccaggcttcattccc 108
>46168_miR166:micropc
Length = 112
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 124 agatctcggaccaggcttcattcc 147
||||||||||||||||||||||||
Sbjct: 89 agatctcggaccaggcttcattcc 112
>45993_miR166:micropc
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattccc 148
||||||||||||||||||||||||
Sbjct: 85 gatctcggaccaggcttcattccc 108
>45971_miR166:micropc
Length = 112
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 124 agatctcggaccaggcttcattcc 147
||||||||||||||||||||||||
Sbjct: 89 agatctcggaccaggcttcattcc 112
>45927_miR166:micropc
Length = 85
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattccc 148
||||||||||||||||||||||||
Sbjct: 62 gatctcggaccaggcttcattccc 85
>45857_miR166:micropc
Length = 104
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 124 agatctcggaccaggcttcattcc 147
||||||||||||||||||||||||
Sbjct: 81 agatctcggaccaggcttcattcc 104
>45417_miR166:micropc
Length = 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattccc 148
||||||||||||||||||||||||
Sbjct: 70 gatctcggaccaggcttcattccc 93
>45340_miR166:micropc
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattccc 148
||||||||||||||||||||||||
Sbjct: 85 gatctcggaccaggcttcattccc 108
>45173_miR166:micropc
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattccc 148
||||||||||||||||||||||||
Sbjct: 85 gatctcggaccaggcttcattccc 108
>45157_miR166:micropc
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattccc 148
||||||||||||||||||||||||
Sbjct: 85 gatctcggaccaggcttcattccc 108
>44860_miR166:micropc
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattccc 148
||||||||||||||||||||||||
Sbjct: 85 gatctcggaccaggcttcattccc 108
>44815_miR166:micropc
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattccc 148
||||||||||||||||||||||||
Sbjct: 85 gatctcggaccaggcttcattccc 108
>46834_miR166:micropc
Length = 89
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattcc 147
|||||||||||||||||||||||
Sbjct: 67 gatctcggaccaggcttcattcc 89
>46806_miR166:micropc
Length = 89
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattcc 147
|||||||||||||||||||||||
Sbjct: 67 gatctcggaccaggcttcattcc 89
>46747_miR166:micropc
Length = 114
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 126 atctcggaccaggcttcattccc 148
|||||||||||||||||||||||
Sbjct: 91 atctcggaccaggcttcattccc 113
>46733_miR166:micropc
Length = 111
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 126 atctcggaccaggcttcattccc 148
|||||||||||||||||||||||
Sbjct: 89 atctcggaccaggcttcattccc 111
>46590_miR166:micropc
Length = 89
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattcc 147
|||||||||||||||||||||||
Sbjct: 67 gatctcggaccaggcttcattcc 89
>46452_miR166:micropc
Length = 89
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattcc 147
|||||||||||||||||||||||
Sbjct: 67 gatctcggaccaggcttcattcc 89
>46436_miR166:micropc
Length = 89
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 125 gatctcggaccaggcttcattcc 147
|||||||||||||||||||||||
Sbjct: 67 gatctcggaccaggcttcattcc 89
>46143_miR166:micropc
Length = 111
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 126 atctcggaccaggcttcattccc 148
|||||||||||||||||||||||
Sbjct: 89 atctcggaccaggcttcattccc 111
>46012_miR166:micropc
Length = 116
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 126 atctcggaccaggcttcattccc 148
|||||||||||||||||||||||
Sbjct: 92 atctcggaccaggcttcattccc 114
>45611_miR166:micropc
Length = 111
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 126 atctcggaccaggcttcattccc 148
|||||||||||||||||||||||
Sbjct: 89 atctcggaccaggcttcattccc 111
>44949_miR166:micropc
Length = 114
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 126 atctcggaccaggcttcattccc 148
|||||||||||||||||||||||
Sbjct: 91 atctcggaccaggcttcattccc 113
>44898_miR166:micropc
Length = 116
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 126 atctcggaccaggcttcattccc 148
|||||||||||||||||||||||
Sbjct: 92 atctcggaccaggcttcattccc 114
>46502_miR166:micropc
Length = 97
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 127 tctcggaccaggcttcattccc 148
||||||||||||||||||||||
Sbjct: 74 tctcggaccaggcttcattccc 95
>46376_miR166:micropc
Length = 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 127 tctcggaccaggcttcattccc 148
||||||||||||||||||||||
Sbjct: 74 tctcggaccaggcttcattccc 95
>46212_miR166:micropc
Length = 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 127 tctcggaccaggcttcattccc 148
||||||||||||||||||||||
Sbjct: 74 tctcggaccaggcttcattccc 95
>46097_miR166:micropc
Length = 94
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 127 tctcggaccaggcttcattccc 148
||||||||||||||||||||||
Sbjct: 73 tctcggaccaggcttcattccc 94
>45842_miR166:micropc
Length = 96
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 127 tctcggaccaggcttcattccc 148
||||||||||||||||||||||
Sbjct: 74 tctcggaccaggcttcattccc 95
>45117_miR166:micropc
Length = 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 127 tctcggaccaggcttcattccc 148
||||||||||||||||||||||
Sbjct: 74 tctcggaccaggcttcattccc 95
>45034_miR166:micropc
Length = 97
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 127 tctcggaccaggcttcattccc 148
||||||||||||||||||||||
Sbjct: 75 tctcggaccaggcttcattccc 96
>45032_miR166:micropc
Length = 97
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 127 tctcggaccaggcttcattccc 148
||||||||||||||||||||||
Sbjct: 75 tctcggaccaggcttcattccc 96
>45026_miR166:micropc
Length = 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 127 tctcggaccaggcttcattccc 148
||||||||||||||||||||||
Sbjct: 74 tctcggaccaggcttcattccc 95
>46743_miR166:micropc
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 127 tctcggaccaggcttcattcc 147
|||||||||||||||||||||
Sbjct: 102 tctcggaccaggcttcattcc 122
>46363_miR166:micropc
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 127 tctcggaccaggcttcattcc 147
|||||||||||||||||||||
Sbjct: 72 tctcggaccaggcttcattcc 92
