miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46252_miR157:micropc
Length = 146
Score = 285 bits (144), Expect = 4e-78
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacac 61
Query: 61 cgcaagtggatataaggaaattcaagaaagagaggaaaaaagagcctgcatctctactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cgcaagtggatataaggaaattcaagaaagagaggaaaaaagagcctgcatctctactct 121
Query: 121 tttgtgctctctatacttctgtca 144
||||||||||||||||||||||||
Sbjct: 122 tttgtgctctctatacttctgtca 145
>45978_miR156:micropc
Length = 138
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 4 cagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacaccgc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacaccgc 60
Query: 64 aagtggatataaggaaattcaagaaagagaggaaaaaagagcctgcatctctactctttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtggatataaggaaattcaagaaagagaggaaaaaagagcctgcatctctactctttt 120
Query: 124 gtgctctctatacttctg 141
||||||||||||||||||
Sbjct: 121 gtgctctctatacttctg 138
>45964_miR157:micropc
Length = 145
Score = 95.6 bits (48), Expect = 9e-21
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 4 cagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacaccgc 63
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 1 cagaagatagagagcactaaggatgacatgcaagtacatatgtatgtatcatcacaccgc 60
>46691_miR157:micropc
Length = 109
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgca 35
||||||||||||||| ||||||||||||| |||||
Sbjct: 1 tgacagaagatagagggcactaaggatgatatgca 35
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 tttgtgctctctatacttctgtca 144
||||||||||||| ||||||||||
Sbjct: 86 tttgtgctctctagacttctgtca 109
>45681_miR157:micropc
Length = 110
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgca 35
||||||||||||||| ||||||||||||| |||||
Sbjct: 2 tgacagaagatagagggcactaaggatgatatgca 36
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 tttgtgctctctatacttctgtca 144
||||||||||||| ||||||||||
Sbjct: 87 tttgtgctctctagacttctgtca 110
>46100_miR157:micropc
Length = 89
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgc 34
||||||||||||||||||||||| ||||| ||||
Sbjct: 1 tgacagaagatagagagcactaatgatgatatgc 34
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 tttgtgctctctatacttctgtca 144
|||||||||||||| |||||||||
Sbjct: 66 tttgtgctctctatgcttctgtca 89
>45968_miR157:micropc
Length = 90
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgc 34
||||||||||||||||||||||| ||||| ||||
Sbjct: 2 tgacagaagatagagagcactaatgatgatatgc 35
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 tttgtgctctctatacttctgtca 144
|||||||||||||| |||||||||
Sbjct: 67 tttgtgctctctatgcttctgtca 90
>45009_miR157:micropc
Length = 99
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgc 34
||||||||||||||||||||||| ||||| ||||
Sbjct: 2 tgacagaagatagagagcactaatgatgatatgc 35
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 108 gcatctctactcttttgtgctctctatacttctgtca 144
||||||| | || |||||||||||||| |||||||||
Sbjct: 63 gcatctcaattcatttgtgctctctatgcttctgtca 99
>44895_miR157:micropc
Length = 98
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgc 34
||||||||||||||||||||||| ||||| ||||
Sbjct: 1 tgacagaagatagagagcactaatgatgatatgc 34
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 108 gcatctctactcttttgtgctctctatacttctgtca 144
||||||| | || |||||||||||||| |||||||||
Sbjct: 62 gcatctcaattcatttgtgctctctatgcttctgtca 98
>46821_miR157:micropc
Length = 84
Score = 46.1 bits (23), Expect = 7e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 106 ctgcatctctactcttttgtgctctctatacttctgtca 144
||||||||| |||| |||||||||||||| |||||||||
Sbjct: 47 ctgcatctc-actcctttgtgctctctatgcttctgtca 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>46572_miR157:micropc
Length = 83
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgca 35
||||||||||||||||||||| | ||||| |||||
Sbjct: 1 tgacagaagatagagagcactgatgatgaaatgca 35
>46518_miR156:micropc
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 4 cagaagatagagagcactaaggatgacatgc 34
|||||||||||||||||||| ||||| ||||
Sbjct: 1 cagaagatagagagcactaatgatgatatgc 31
>46149_miR156:micropc
Length = 83
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 4 cagaagatagagagcactaaggatgacatgc 34
|||||||||||||||||||| ||||| ||||
Sbjct: 1 cagaagatagagagcactaatgatgatatgc 31
>45538_miR157:micropc
Length = 85
Score = 46.1 bits (23), Expect = 7e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 106 ctgcatctctactcttttgtgctctctatacttctgtca 144
||||||||| |||| |||||||||||||| |||||||||
Sbjct: 48 ctgcatctc-actcctttgtgctctctatgcttctgtca 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>44931_miR157:micropc
Length = 84
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgca 35
||||||||||||||||||||| | ||||| |||||
Sbjct: 2 tgacagaagatagagagcactgatgatgaaatgca 36
>46830_miR157:micropc
Length = 81
Score = 44.1 bits (22), Expect = 3e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 107 tgcatctctactcttttgtgctctctatacttctgtca 144
|||||||| |||| |||||||||||||| |||||||||
Sbjct: 45 tgcatctc-actcctttgtgctctctatgcttctgtca 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>46542_miR157:micropc
Length = 82
Score = 44.1 bits (22), Expect = 3e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 107 tgcatctctactcttttgtgctctctatacttctgtca 144
|||||||| |||| |||||||||||||| |||||||||
Sbjct: 46 tgcatctc-actcctttgtgctctctatgcttctgtca 82
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>46109_miR157:micropc
Length = 78
Score = 44.1 bits (22), Expect = 3e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 107 tgcatctctactcttttgtgctctctatacttctgtca 144
|||||||| |||| ||||| ||||||||||||||||||
Sbjct: 42 tgcatctc-actcctttgtactctctatacttctgtca 78
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatga 29
|||||||||||||||||||| || |||||
Sbjct: 1 tgacagaagatagagagcaccaacgatga 29
>45887_miR157:micropc
Length = 79
Score = 44.1 bits (22), Expect = 3e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 107 tgcatctctactcttttgtgctctctatacttctgtca 144
|||||||| |||| ||||| ||||||||||||||||||
Sbjct: 43 tgcatctc-actcctttgtactctctatacttctgtca 79
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatga 29
|||||||||||||||||||| || |||||
Sbjct: 2 tgacagaagatagagagcaccaacgatga 30
>45460_miR157:micropc
Length = 81
Score = 44.1 bits (22), Expect = 3e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 107 tgcatctctactcttttgtgctctctatacttctgtca 144
|||||||| |||| |||||||||||||| |||||||||
Sbjct: 45 tgcatctc-actcctttgtgctctctatgcttctgtca 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>44822_miR157:micropc
Length = 80
Score = 44.1 bits (22), Expect = 3e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 107 tgcatctctactcttttgtgctctctatacttctgtca 144
|||||||| |||| |||||||||||||| |||||||||
Sbjct: 44 tgcatctc-actcctttgtgctctctatgcttctgtca 80
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>46718_miR157:micropc
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 116 actcttttgtgctctctatacttctgtca 144
|||| |||||||||||||| |||||||||
Sbjct: 56 actcctttgtgctctctatgcttctgtca 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>45409_miR157:micropc
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 116 actcttttgtgctctctatacttctgtca 144
|||| |||||||||||||| |||||||||
Sbjct: 57 actcctttgtgctctctatgcttctgtca 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>46812_miR157:micropc
Length = 79
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>46595_miR157:micropc
Length = 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>46391_miR157:micropc
Length = 129
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>46332_miR157:micropc
Length = 162
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 tttgtgctctctatacttctgtca 144
|||||||||||||| |||||||||
Sbjct: 139 tttgtgctctctatgcttctgtca 162
>45959_miR157:micropc
Length = 161
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 tttgtgctctctatacttctgtca 144
|||||||||||||| |||||||||
Sbjct: 138 tttgtgctctctatgcttctgtca 161
>45944_miR157:micropc
Length = 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>45936_miR157:micropc
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>45911_miR157:micropc
Length = 130
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>45761_miR157:micropc
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 tttgtgctctctatacttctgtca 144
|||||||||||||| |||||||||
Sbjct: 60 tttgtgctctctattcttctgtca 83
>45574_miR157:micropc
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>45172_miR157:micropc
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>45152_miR157:micropc
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>45004_miR156:micropc
Length = 78
Score = 40.1 bits (20), Expect = 4e-04
Identities = 33/36 (91%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 106 ctgcatctctactcttttgtgctctctatacttctg 141
||||||||| |||| |||||||||||||| ||||||
Sbjct: 44 ctgcatctc-actcctttgtgctctctatgcttctg 78
>44919_miR157:micropc
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>44856_miR156:micropc
Length = 77
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 4 cagaagatagagagcactaaggatgacatgca 35
|||||||||||||||||| | ||||| |||||
Sbjct: 1 cagaagatagagagcactgatgatgaaatgca 32
>44820_miR157:micropc
Length = 137
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
