miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46541_miR160:micropc
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccttgtatgccattcgtggagtctatccatacgcggccagccttcgtggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccttgtatgccattcgtggagtctatccatacgcggccagccttcgtggat 60
Query: 61 ggcatgctcggagccatgca 80
||||||||||||||||||||
Sbjct: 61 ggcatgctcggagccatgca 80
>46539_miR160:micropc
Length = 80
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 tgcctggctccttgtatgccattcgtggagtctatccatacgcggccagccttcgtggat 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgcctggctccttgtatgccattcgtggagtctatccatgcgcggccagccttcgtggat 60
Query: 61 ggcatgctcggagccatgca 80
||||||||||||||||||||
Sbjct: 61 ggcatgctcggagccatgca 80
>45958_miR160:micropc
Length = 80
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 tgcctggctccttgtatgccattcgtggagtctatccatacgcggccagccttcgtggat 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgcctggctccttgtatgccattcgtggagtctatccatgcgcggccagccttcgtggat 60
Query: 61 ggcatgctcggagccatgca 80
||||||||||||||||||||
Sbjct: 61 ggcatgctcggagccatgca 80
>46515_miR160:micropc
Length = 78
Score = 147 bits (74), Expect = 1e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 2 gcctggctccttgtatgccattcgtggagtctatccatacgcggccagccttcgtggatg 61
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 gcctggctccttgtatgccattcgtggagtctatccatgcgcggccagccttcgtggatg 60
Query: 62 gcatgctcggagccatgc 79
||||||||||||||||||
Sbjct: 61 gcatgctcggagccatgc 78
>46141_miR160:micropc
Length = 78
Score = 147 bits (74), Expect = 1e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 2 gcctggctccttgtatgccattcgtggagtctatccatacgcggccagccttcgtggatg 61
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 gcctggctccttgtatgccattcgtggagtctatccatgcgcggccagccttcgtggatg 60
Query: 62 gcatgctcggagccatgc 79
||||||||||||||||||
Sbjct: 61 gcatgctcggagccatgc 78
>46776_miR160:micropc
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccttgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccttgtatgcca 21
>46630_miR160:micropc
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccttgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccttgtatgcca 21
>46661_miR160:micropc
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 gcctggctccttgtatgcca 21
||||||||||||||||||||
Sbjct: 1 gcctggctccttgtatgcca 20
>46665_miR160:micropc
Length = 81
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccttgtatgccatt 23
||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccatt 23
>46531_miR160:micropc
Length = 80
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccttgtatgccatt 23
||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccatt 23
>45916_miR160:micropc
Length = 80
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccttgtatgccatt 23
||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccatt 23
>45760_miR160:micropc
Length = 81
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccttgtatgccatt 23
||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccatt 23
>45756_miR160:micropc
Length = 80
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccttgtatgccatt 23
||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccatt 23
>45701_miR160:micropc
Length = 80
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccttgtatgccatt 23
||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccatt 23
>45645_miR160:micropc
Length = 80
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccttgtatgccatt 23
||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccatt 23
>45584_miR160:micropc
Length = 80
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccttgtatgccatt 23
||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccatt 23
>45059_miR160:micropc
Length = 80
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccttgtatgccatt 23
||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccatt 23
>44960_miR160:micropc
Length = 80
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccttgtatgccatt 23
||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccatt 23
