miRNEST 2.0, an integrative microRNA resource :: BLAST
>46836_miR1439:micropc
Length = 86
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 51 aaaaatgctcttatattatgggacggagggagt 83
||||||||||||||||| |||||||||||||||
Sbjct: 52 aaaaatgctcttatattttgggacggagggagt 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 50 caaaaatgctcttatattatgggacggagggagt 83
|||||| ||||||||||| || ||||||||||||
Sbjct: 35 caaaaacgctcttatattttgagacggagggagt 2
>46560_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 51 aaaaatgctcttatattatgggacggagggagt 83
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataagaacgttttt 33
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46416_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 51 aaaaatgctcttatattatgggacggagggagt 83
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataagaacgttttt 33
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46351_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 51 aaaaatgctcttatattatgggacggagggagt 83
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataagaacgttttt 33
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46296_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 51 aaaaatgctcttatattatgggacggagggagt 83
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataagaacgttttt 33
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46229_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 51 aaaaatgctcttatattatgggacggagggagt 83
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataagaacgttttt 33
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46082_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 51 aaaaatgctcttatattatgggacggagggagt 83
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataagaacgttttt 33
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45853_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 51 aaaaatgctcttatattatgggacggagggagt 83
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataagaacgttttt 33
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45812_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 51 aaaaatgctcttatattatgggacggagggagt 83
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataagaacgttttt 33
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45616_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 51 aaaaatgctcttatattatgggacggagggagt 83
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataagaacgttttt 33
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45608_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 51 aaaaatgctcttatattatgggacggagggagt 83
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataagaacgttttt 33
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45459_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 51 aaaaatgctcttatattatgggacggagggagt 83
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataagaacgttttt 33
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45450_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 51 aaaaatgctcttatattatgggacggagggagt 83
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataagaacgttttt 33
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45382_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 51 aaaaatgctcttatattatgggacggagggagt 83
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataagaacgttttt 33
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45149_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 51 aaaaatgctcttatattatgggacggagggagt 83
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataagaacgttttt 33
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>44955_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 51 aaaaatgctcttatattatgggacggagggagt 83
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataagaacgttttt 33
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46683_miR1436:micropc
Length = 60
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 60 cttatattatgggacggagggagt 83
||||||||||||||||||||||||
Sbjct: 37 cttatattatgggacggagggagt 60
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataag 24
||||||||||| ||||||||||||
Sbjct: 60 actccctccgtcccataatataag 37
>45994_miR1436:micropc
Length = 162
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataag 24
||||||||||||||||||||||||
Sbjct: 162 actccctccgttccataatataag 139
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 60 cttatattatgggacggagggagt 83
|||||||||||| |||||||||||
Sbjct: 139 cttatattatggaacggagggagt 162
>46825_miR1436:micropc
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatata 22
||||||||||||||||||||||
Sbjct: 89 actccctccgttccataatata 68
>46353_miR1436:micropc
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatata 22
||||||||||||||||||||||
Sbjct: 89 actccctccgttccataatata 68
>46261_miR1120:micropc
Length = 76
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 6 ctccgttccataatataagaacgtttttcaagctaaca 43
|||||| |||||||||||||| | ||||||||||||||
Sbjct: 76 ctccgtcccataatataagaatg-ttttcaagctaaca 40
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 tcttatattatgggacggag 78
||||||||||||||||||||
Sbjct: 57 tcttatattatgggacggag 76
>46194_miR1436:micropc
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 50 caaaaatgctcttatattatgggacggagggagt 83
|||||| ||| |||||||||| ||||||||||||
Sbjct: 50 caaaaacgcttttatattatgagacggagggagt 83
>45775_miR1436:micropc
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatata 22
||||||||||||||||||||||
Sbjct: 89 actccctccgttccataatata 68
>46428_miR1436:micropc
Length = 69
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 actccctccgttccataatataaga 25
||||||||||||||||||| |||||
Sbjct: 1 actccctccgttccataatgtaaga 25
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 tcttatattatgggacggagggagt 83
||||| |||||||||||||||||||
Sbjct: 45 tcttacattatgggacggagggagt 69
>46264_miR1436:micropc
Length = 69
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 actccctccgttccataatataaga 25
||||||||||||||||||| |||||
Sbjct: 1 actccctccgttccataatgtaaga 25
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 tcttatattatgggacggagggagt 83
||||| |||||||||||||||||||
Sbjct: 45 tcttacattatgggacggagggagt 69
>45676_miR1436:micropc
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 1 actccctccgttccataatataagaacgttttt 33
|||||||||| |||||||||||| ||||||||
Sbjct: 85 actccctccgccccataatataagtacgttttt 53
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 60 cttatattatgggacggagggagt 83
||||||||||||| ||||||||||
Sbjct: 62 cttatattatggggcggagggagt 85
>45393_miR1436:micropc
Length = 69
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 actccctccgttccataatataaga 25
||||||||||||||||||| |||||
Sbjct: 1 actccctccgttccataatgtaaga 25
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 tcttatattatgggacggagggagt 83
||||| |||||||||||||||||||
Sbjct: 45 tcttacattatgggacggagggagt 69
>45005_miR1436:micropc
Length = 69
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 actccctccgttccataatataaga 25
||||||||||||||||||| |||||
Sbjct: 1 actccctccgttccataatgtaaga 25
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 tcttatattatgggacggagggagt 83
||||| |||||||||||||||||||
Sbjct: 45 tcttacattatgggacggagggagt 69
>44928_miR1436:micropc
Length = 69
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 actccctccgttccataatataaga 25
||||||||||||||||||| |||||
Sbjct: 1 actccctccgttccataatgtaaga 25
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 tcttatattatgggacggagggagt 83
||||| |||||||||||||||||||
Sbjct: 45 tcttacattatgggacggagggagt 69
