miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46603_miR806:micropc
          Length = 188

 Score =  170 bits (86), Expect = 2e-43
 Identities = 144/166 (86%)
 Strand = Plus / Minus

                                                                       
Query: 12  ttttaacacatgtttgaccgttcatcttattcaaaaacttttgtaaaatatgtaaaacta 71
           ||||| ||||| ||| |||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 177 ttttagcacatatttaaccgttcatcttattcaaaaacttttgtgaaatatgtaaaatta 118

                                                                       
Query: 72  tacgtatgcataaaagtatatttaacaatgaatcaaattataggnnnnnnnntaataatt 131
           || |  ||||| ||| |||||||||||||||||||||| |||||        ||||||||
Sbjct: 117 tatgcctgcatgaaaatatatttaacaatgaatcaaatgataggaaaagaattaataatt 58

                                                         
Query: 132 atttaaattttttgaataagacgagcggtcaaacatgtgctaaaaa 177
           | |||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 57  acttaaattttttgaataagacgaacggtcaaacatgtgcttaaaa 12



 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 140 tttttgaataagacgagcggtcaaacatgtgctaaaaagtcaatggtg 187
           ||||||||||||| || |||| ||| ||||||||||||||||| ||||
Sbjct: 141 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtg 188



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 18 cacatgtttgaccgttcatcttattcaaaaa 48
          ||||||||||||||||| |||||||||||||
Sbjct: 19 cacatgtttgaccgttcgtcttattcaaaaa 49




>46529_miR806:micropc
          Length = 188

 Score =  170 bits (86), Expect = 2e-43
 Identities = 144/166 (86%)
 Strand = Plus / Minus

                                                                       
Query: 12  ttttaacacatgtttgaccgttcatcttattcaaaaacttttgtaaaatatgtaaaacta 71
           ||||| ||||| ||| |||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 177 ttttagcacatatttaaccgttcatcttattcaaaaacttttgtgaaatatgtaaaatta 118

                                                                       
Query: 72  tacgtatgcataaaagtatatttaacaatgaatcaaattataggnnnnnnnntaataatt 131
           || |  ||||| ||| |||||||||||||||||||||| |||||        ||||||||
Sbjct: 117 tatgcctgcatgaaaatatatttaacaatgaatcaaatgataggaaaagaattaataatt 58

                                                         
Query: 132 atttaaattttttgaataagacgagcggtcaaacatgtgctaaaaa 177
           | |||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 57  acttaaattttttgaataagacgaacggtcaaacatgtgcttaaaa 12



 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 140 tttttgaataagacgagcggtcaaacatgtgctaaaaagtcaatggtg 187
           ||||||||||||| || |||| ||| ||||||||||||||||| ||||
Sbjct: 141 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtg 188



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 18 cacatgtttgaccgttcatcttattcaaaaa 48
          ||||||||||||||||| |||||||||||||
Sbjct: 19 cacatgtttgaccgttcgtcttattcaaaaa 49




>45954_miR806:micropc
          Length = 188

 Score =  170 bits (86), Expect = 2e-43
 Identities = 144/166 (86%)
 Strand = Plus / Minus

                                                                       
Query: 12  ttttaacacatgtttgaccgttcatcttattcaaaaacttttgtaaaatatgtaaaacta 71
           ||||| ||||| ||| |||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 177 ttttagcacatatttaaccgttcatcttattcaaaaacttttgtgaaatatgtaaaatta 118

                                                                       
Query: 72  tacgtatgcataaaagtatatttaacaatgaatcaaattataggnnnnnnnntaataatt 131
           || |  ||||| ||| |||||||||||||||||||||| |||||        ||||||||
Sbjct: 117 tatgcctgcatgaaaatatatttaacaatgaatcaaatgataggaaaagaattaataatt 58

                                                         
Query: 132 atttaaattttttgaataagacgagcggtcaaacatgtgctaaaaa 177
           | |||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 57  acttaaattttttgaataagacgaacggtcaaacatgtgcttaaaa 12



 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 140 tttttgaataagacgagcggtcaaacatgtgctaaaaagtcaatggtg 187
           ||||||||||||| || |||| ||| ||||||||||||||||| ||||
Sbjct: 141 tttttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtg 188



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 18 cacatgtttgaccgttcatcttattcaaaaa 48
          ||||||||||||||||| |||||||||||||
Sbjct: 19 cacatgtttgaccgttcgtcttattcaaaaa 49