miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45708_miR809:micropc
Length = 100
Score = 67.9 bits (34), Expect = 9e-13
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 1 attctaacattttttatattcatattgatattaataaatttagata 46
|||||||||||||| |||||||||||||||||||| ||| ||||||
Sbjct: 1 attctaacatttttcatattcatattgatattaatgaatctagata 46
>46833_miR446:micropc
Length = 81
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 18 attcatattgatattaataaatttagata 46
|||||||||||| ||||| ||||||||||
Sbjct: 71 attcatattgatgttaatgaatttagata 43
>46060_miR809:micropc
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 1 attctaacattttttatattcatattgatattaataaatttaga 44
|||||| |||||| |||||||||||||| ||||| ||| ||||
Sbjct: 1 attctagcattttccatattcatattgatgttaatgaatctaga 44
>46589_miR809:micropc
Length = 100
Score = 38.2 bits (19), Expect = 8e-04
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1 attctaacattttttatattcatattgatattaat 35
|||||||||||||| | ||||||| |||||||||
Sbjct: 100 attctaacatttttcacgttcatatcgatattaat 66
>46336_miR809:micropc
Length = 98
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 44 atataaatatgaatgtgagaaat 66
|||||||||||||||||| ||||
Sbjct: 68 atataaatatgaatgtgaaaaat 90
>46318_miR446:micropc
Length = 86
Score = 38.2 bits (19), Expect = 8e-04
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 15 tatattcatattgatattaataaatttagatataaatat 53
|||||||||||||| ||||||||| |||| ||| ||||
Sbjct: 79 tatattcatattgacgttaataaatctagacatatatat 41
>45839_miR809:micropc
Length = 98
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 44 atataaatatgaatgtgagaaat 66
|||||||||||||||||| ||||
Sbjct: 68 atataaatatgaatgtgaaaaat 90
