miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46103_miR319:micropc
Length = 172
Score = 341 bits (172), Expect = 1e-94
Identities = 172/172 (100%)
Strand = Plus / Plus
Query: 1 ggagctctctatcgcctcgaccctgaaaggaaatcgatcatggtggttcatggctgctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagctctctatcgcctcgaccctgaaaggaaatcgatcatggtggttcatggctgctct 60
Query: 61 ttcatgaatgcttgtaggtgcaccaatgttgttgtagtgtgcattctaaggttagcatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcatgaatgcttgtaggtgcaccaatgttgttgtagtgtgcattctaaggttagcatga 120
Query: 121 aggtggagccatggtttgatcatctttttgggattggggtgaagggagctcc 172
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggtggagccatggtttgatcatctttttgggattggggtgaagggagctcc 172
>45517_miR159:micropc
Length = 173
Score = 341 bits (172), Expect = 1e-94
Identities = 172/172 (100%)
Strand = Plus / Plus
Query: 1 ggagctctctatcgcctcgaccctgaaaggaaatcgatcatggtggttcatggctgctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagctctctatcgcctcgaccctgaaaggaaatcgatcatggtggttcatggctgctct 60
Query: 61 ttcatgaatgcttgtaggtgcaccaatgttgttgtagtgtgcattctaaggttagcatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcatgaatgcttgtaggtgcaccaatgttgttgtagtgtgcattctaaggttagcatga 120
Query: 121 aggtggagccatggtttgatcatctttttgggattggggtgaagggagctcc 172
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggtggagccatggtttgatcatctttttgggattggggtgaagggagctcc 172
>45527_miR159:micropc
Length = 170
Score = 337 bits (170), Expect = 2e-93
Identities = 170/170 (100%)
Strand = Plus / Plus
Query: 2 gagctctctatcgcctcgaccctgaaaggaaatcgatcatggtggttcatggctgctctt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagctctctatcgcctcgaccctgaaaggaaatcgatcatggtggttcatggctgctctt 60
Query: 62 tcatgaatgcttgtaggtgcaccaatgttgttgtagtgtgcattctaaggttagcatgaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcatgaatgcttgtaggtgcaccaatgttgttgtagtgtgcattctaaggttagcatgaa 120
Query: 122 ggtggagccatggtttgatcatctttttgggattggggtgaagggagctc 171
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtggagccatggtttgatcatctttttgggattggggtgaagggagctc 170
>46773_miR159:micropc
Length = 172
Score = 285 bits (144), Expect = 5e-78
Identities = 165/172 (95%)
Strand = Plus / Plus
Query: 1 ggagctctctatcgcctcgaccctgaaaggaaatcgatcatggtggttcatggctgctct 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagctctctatcgcctcaaccctgaaaggaaatcgatcatggtggttcatggctgctct 60
Query: 61 ttcatgaatgcttgtaggtgcaccaatgttgttgtagtgtgcattctaaggttagcatga 120
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 ttcatgaatgcctgtaggtgcaccaatggtgttgtagtgtgcattctaaggttagcatga 120
Query: 121 aggtggagccatggtttgatcatctttttgggattggggtgaagggagctcc 172
||||||||| ||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 121 aggtggagctgtggttcgatcatccttttgggattggggtgaagggagctcc 172
>46547_miR319:micropc
Length = 172
Score = 285 bits (144), Expect = 5e-78
Identities = 165/172 (95%)
Strand = Plus / Plus
Query: 1 ggagctctctatcgcctcgaccctgaaaggaaatcgatcatggtggttcatggctgctct 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagctctctatcgcctcaaccctgaaaggaaatcgatcatggtggttcatggctgctct 60
Query: 61 ttcatgaatgcttgtaggtgcaccaatgttgttgtagtgtgcattctaaggttagcatga 120
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 ttcatgaatgcctgtaggtgcaccaatggtgttgtagtgtgcattctaaggttagcatga 120
Query: 121 aggtggagccatggtttgatcatctttttgggattggggtgaagggagctcc 172
||||||||| ||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 121 aggtggagctgtggttcgatcatccttttgggattggggtgaagggagctcc 172
>45950_miR159:micropc
Length = 173
Score = 285 bits (144), Expect = 5e-78
Identities = 165/172 (95%)
Strand = Plus / Plus
Query: 1 ggagctctctatcgcctcgaccctgaaaggaaatcgatcatggtggttcatggctgctct 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagctctctatcgcctcaaccctgaaaggaaatcgatcatggtggttcatggctgctct 60
Query: 61 ttcatgaatgcttgtaggtgcaccaatgttgttgtagtgtgcattctaaggttagcatga 120
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 ttcatgaatgcctgtaggtgcaccaatggtgttgtagtgtgcattctaaggttagcatga 120
Query: 121 aggtggagccatggtttgatcatctttttgggattggggtgaagggagctcc 172
||||||||| ||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 121 aggtggagctgtggttcgatcatccttttgggattggggtgaagggagctcc 172
>45899_miR159:micropc
Length = 170
Score = 281 bits (142), Expect = 8e-77
Identities = 163/170 (95%)
Strand = Plus / Plus
Query: 2 gagctctctatcgcctcgaccctgaaaggaaatcgatcatggtggttcatggctgctctt 61
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagctctctatcgcctcaaccctgaaaggaaatcgatcatggtggttcatggctgctctt 60
Query: 62 tcatgaatgcttgtaggtgcaccaatgttgttgtagtgtgcattctaaggttagcatgaa 121
|||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 tcatgaatgcctgtaggtgcaccaatggtgttgtagtgtgcattctaaggttagcatgaa 120
Query: 122 ggtggagccatggtttgatcatctttttgggattggggtgaagggagctc 171
|||||||| ||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 121 ggtggagctgtggttcgatcatccttttgggattggggtgaagggagctc 170
