miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46498_miR1436:micropc
Length = 138
Score = 256 bits (129), Expect = 4e-69
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60
Query: 61 ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120
Query: 121 ttatgggacggagggagt 138
||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138
>46084_miR1436:micropc
Length = 138
Score = 256 bits (129), Expect = 4e-69
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60
Query: 61 ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120
Query: 121 ttatgggacggagggagt 138
||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138
>45568_miR1436:micropc
Length = 138
Score = 256 bits (129), Expect = 4e-69
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60
Query: 61 ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120
Query: 121 ttatgggacggagggagt 138
||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138
>45497_miR1436:micropc
Length = 138
Score = 256 bits (129), Expect = 4e-69
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60
Query: 61 ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120
Query: 121 ttatgggacggagggagt 138
||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138
>45178_miR1436:micropc
Length = 138
Score = 256 bits (129), Expect = 4e-69
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60
Query: 61 ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120
Query: 121 ttatgggacggagggagt 138
||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138
>45591_miR1128:micropc
Length = 141
Score = 214 bits (108), Expect = 1e-56
Identities = 131/139 (94%), Gaps = 1/139 (0%)
Strand = Plus / Plus
Query: 1 actccctccgtcccaaaagtnaatctanc-tctgtatgtgacacattatagtacaacgaa 59
||||||||||||| |||||| |||||| | ||||||||||||||||||||||||||||||
Sbjct: 2 actccctccgtccgaaaagtgaatctagcctctgtatgtgacacattatagtacaacgaa 61
Query: 60 tctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggttt 119
| |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||
Sbjct: 62 tgtggatagaaatatgtgtagattcgtagtactaggatntgtcgcatcgagtnttggttt 121
Query: 120 tttatgggacggagggagt 138
|||||||||||||||||||
Sbjct: 122 tttatgggacggagggagt 140
>44936_miR1128:micropc
Length = 141
Score = 214 bits (108), Expect = 1e-56
Identities = 131/139 (94%), Gaps = 1/139 (0%)
Strand = Plus / Plus
Query: 1 actccctccgtcccaaaagtnaatctanc-tctgtatgtgacacattatagtacaacgaa 59
||||||||||||| |||||| |||||| | ||||||||||||||||||||||||||||||
Sbjct: 2 actccctccgtccgaaaagtgaatctagcctctgtatgtgacacattatagtacaacgaa 61
Query: 60 tctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggttt 119
| |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||
Sbjct: 62 tgtggatagaaatatgtgtagattcgtagtactaggatntgtcgcatcgagtnttggttt 121
Query: 120 tttatgggacggagggagt 138
|||||||||||||||||||
Sbjct: 122 tttatgggacggagggagt 140
>46674_miR816:micropc
Length = 68
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 37 gtgacacattatagtacaacgaatctgga 65
|||||| ||| ||||||||||||||||||
Sbjct: 1 gtgacatattctagtacaacgaatctgga 29
