miRNEST 2.0, an integrative microRNA resource :: BLAST
>46464_miR1132:micropc
Length = 149
Score = 79.8 bits (40), Expect = 6e-16
Identities = 91/108 (84%)
Strand = Plus / Plus
Query: 53 attcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctat 112
|||||||||||||||||||||||||| |||| ||||| ||||||||||||| |||||
Sbjct: 42 attcatatagatattaatgaatctaggcatatatatgtgtttagattcattaacttctat 101
Query: 113 atgaatatggacaacgctataaagtcttacattgtgaaacggatggag 160
|| ||||||| | |||| ||| || |||||| ||||||||| ||||
Sbjct: 102 ataaatatgggtagtgctagaaaatcctacattatgaaacggagggag 149
Score = 69.9 bits (35), Expect = 6e-13
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 57 atatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatga 116
||||||| |||||||||||| | ||||| | || |||||||||||| |||||||||
Sbjct: 103 atatagaagttaatgaatctaaacacatatatatgcctagattcattaatatctatatga 44
Query: 117 atatggacaacgctataaagtcttacattgtgaaacgga 155
||||| ||| |||| ||||| |||||||||||||||||
Sbjct: 43 atatgtgcaatgctagaaagtattacattgtgaaacgga 5
>45514_miR1132:micropc
Length = 149
Score = 79.8 bits (40), Expect = 6e-16
Identities = 91/108 (84%)
Strand = Plus / Plus
Query: 53 attcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctat 112
|||||||||||||||||||||||||| |||| ||||| ||||||||||||| |||||
Sbjct: 42 attcatatagatattaatgaatctaggcatatatatgtgtttagattcattaacttctat 101
Query: 113 atgaatatggacaacgctataaagtcttacattgtgaaacggatggag 160
|| ||||||| | |||| ||| || |||||| ||||||||| ||||
Sbjct: 102 ataaatatgggtagtgctagaaaatcctacattatgaaacggagggag 149
Score = 69.9 bits (35), Expect = 6e-13
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 57 atatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatga 116
||||||| |||||||||||| | ||||| | || |||||||||||| |||||||||
Sbjct: 103 atatagaagttaatgaatctaaacacatatatatgcctagattcattaatatctatatga 44
Query: 117 atatggacaacgctataaagtcttacattgtgaaacgga 155
||||| ||| |||| ||||| |||||||||||||||||
Sbjct: 43 atatgtgcaatgctagaaagtattacattgtgaaacgga 5
>45099_miR1132:micropc
Length = 149
Score = 79.8 bits (40), Expect = 6e-16
Identities = 91/108 (84%)
Strand = Plus / Plus
Query: 53 attcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctat 112
|||||||||||||||||||||||||| |||| ||||| ||||||||||||| |||||
Sbjct: 42 attcatatagatattaatgaatctaggcatatatatgtgtttagattcattaacttctat 101
Query: 113 atgaatatggacaacgctataaagtcttacattgtgaaacggatggag 160
|| ||||||| | |||| ||| || |||||| ||||||||| ||||
Sbjct: 102 ataaatatgggtagtgctagaaaatcctacattatgaaacggagggag 149
Score = 69.9 bits (35), Expect = 6e-13
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 57 atatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatga 116
||||||| |||||||||||| | ||||| | || |||||||||||| |||||||||
Sbjct: 103 atatagaagttaatgaatctaaacacatatatatgcctagattcattaatatctatatga 44
Query: 117 atatggacaacgctataaagtcttacattgtgaaacgga 155
||||| ||| |||| ||||| |||||||||||||||||
Sbjct: 43 atatgtgcaatgctagaaagtattacattgtgaaacgga 5
>45731_miR446:micropc
Length = 86
Score = 69.9 bits (35), Expect = 6e-13
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtcta 111
||||||||||||| |||||||||||| | |||||||||| ||||||||||||| || |
Sbjct: 10 cattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaa 69
Query: 112 tatgaat 118
|||||||
Sbjct: 70 tatgaat 76
Score = 63.9 bits (32), Expect = 4e-11
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 47 gcccgcattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaac 106
|||| ||||||||| ||| |||||||||||||| || || | ||| ||||||||||||
Sbjct: 82 gcccacattcatattgatgttaatgaatctagacacacatatatgtttagattcattaaa 23
Query: 107 gtctatatgaatatggacaa 126
||||||||||| |||||||
Sbjct: 22 atctatatgaatgtggacaa 3
>44978_miR1130:micropc
Length = 144
Score = 69.9 bits (35), Expect = 6e-13
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 53 attcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctat 112
|||||||||||| | ||| |||||| | ||||||||| ||||||||||| | | |||
Sbjct: 105 attcatatagatgtcaataaatctaaacatatatgtgtgcttagattcattagcatatat 46
Query: 113 atgaatatggacaacgctataaagtcttacattgtgaaacgga 155
|| ||| ||||||| |||| ||||||||||||| |||||||||
Sbjct: 45 ataaatgtggacaatgctagaaagtcttacattatgaaacgga 3
>45260_miR819:micropc
Length = 116
Score = 61.9 bits (31), Expect = 1e-10
Identities = 75/89 (84%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 53 attcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctat 112
||||||||| || |||||||||||| | ||||| ||||| || |||||||||| |||||
Sbjct: 27 attcatatatatgttaatgaatctaaa--catatatgtgtctatattcattaacatctat 84
Query: 113 atgaatatggacaacgctataaagtctta 141
|| ||||||||| | ||| |||||||||
Sbjct: 85 ataaatatggacnatactagaaagtctta 113
Score = 60.0 bits (30), Expect = 6e-10
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 57 atatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatga 116
|||||||| ||||||||| |||| ||||| ||| | |||||||||||| | |||||||
Sbjct: 86 atatagatgttaatgaatatagacacatatatgttt--agattcattaacatatatatga 29
Query: 117 atatggacaacgctataaagtctta 141
||||||| || |||| |||||||||
Sbjct: 28 atatggataatgctagaaagtctta 4
>45075_miR819:micropc
Length = 116
Score = 61.9 bits (31), Expect = 1e-10
Identities = 75/89 (84%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 53 attcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctat 112
||||||||| || |||||||||||| | ||||| ||||| || |||||||||| |||||
Sbjct: 27 attcatatatatgttaatgaatctaaa--catatatgtgtctatattcattaacatctat 84
Query: 113 atgaatatggacaacgctataaagtctta 141
|| ||||||||| | ||| |||||||||
Sbjct: 85 ataaatatggacnatactagaaagtctta 113
Score = 60.0 bits (30), Expect = 6e-10
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 57 atatagatattaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatga 116
|||||||| ||||||||| |||| ||||| ||| | |||||||||||| | |||||||
Sbjct: 86 atatagatgttaatgaatatagacacatatatgttt--agattcattaacatatatatga 29
Query: 117 atatggacaacgctataaagtctta 141
||||||| || |||| |||||||||
Sbjct: 28 atatggataatgctagaaagtctta 4
>45708_miR809:micropc
Length = 100
Score = 56.0 bits (28), Expect = 9e-09
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 53 attcatatagatattaatgaatctagattcatatgtgtgtgtagattcatta 104
|||||||| ||||||||||||||||||| |||| | ||| |||||||||||
Sbjct: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcatta 69
>46833_miR446:micropc
Length = 81
Score = 54.0 bits (27), Expect = 3e-08
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaac 106
||||||||| ||| ||||||||| ||||| |||||| ||| |||||||||||||
Sbjct: 72 cattcatattgatgttaatgaatttagatagatatgtatgtctagattcattaac 18
>45215_miR1120:micropc
Length = 142
Score = 52.0 bits (26), Expect = 1e-07
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 66 ttaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatatggaca 125
||||||||||||||| || | ||||| || |||||||||| |||||||| ||||| ||
Sbjct: 52 ttaatgaatctagatatatttatgtgtttaaattcattaacatctatatgtatatgagca 111
Query: 126 acgctataaagtcttacattgtgaaacgga 155
| | || ||| ||||| ||| |||||||||
Sbjct: 112 atgttagaaattcttatattatgaaacgga 141
>46801_miR809:micropc
Length = 110
Score = 46.1 bits (23), Expect = 8e-06
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 52 cattcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaac 106
||||||||| || ||||||||||||||| |||| | ||| |||||||||||||
Sbjct: 17 cattcatattaatgttaatgaatctagatagatatatatgtttagattcattaac 71
>46437_miR1436:micropc
Length = 108
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 113 atgaatatggacaacgctataaagtcttacattgtgaaa 151
||||||||| ||| |||| |||||||||||||||||||
Sbjct: 49 atgaatatgagcaatgctagaaagtcttacattgtgaaa 11
Score = 44.1 bits (22), Expect = 3e-05
Identities = 54/62 (87%), Gaps = 2/62 (3%)
Strand = Plus / Minus
Query: 14 cctccgtttcacaatgta-gactttctacgtatcgcccgcattcatatagatattaatga 72
||||||||||| |||||| || |||||| | || |||| ||| |||||||||||||||||
Sbjct: 104 cctccgtttcataatgtaagattttcta-gcattgcccacatacatatagatattaatga 46
Query: 73 at 74
||
Sbjct: 45 at 44
>46318_miR446:micropc
Length = 86
Score = 46.1 bits (23), Expect = 8e-06
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 66 ttaatgaatctagattcatatgtgtgtgtagattcattaacgtctatatgaatat 120
|||||||||||| || |||| | ||| |||||| ||||||||| ||||||||||
Sbjct: 24 ttaatgaatctatatagatatatatgtctagatttattaacgtcaatatgaatat 78
>46637_miR446:micropc
Length = 80
Score = 44.1 bits (22), Expect = 3e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 53 attcatatagatattaatgaatctagattcatatgtgtgtgtagattcattaac 106
|||||||| ||| ||||||||||||| | |||| | ||| |||||||||||||
Sbjct: 72 attcatattgatgttaatgaatctagctagatatatatgtctagattcattaac 19
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 94 tagattcattaacgtctatatgaatatgg 122
||||||||||||| || ||||||||||||
Sbjct: 48 tagattcattaacatcaatatgaatatgg 76
>46060_miR809:micropc
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 94 tagattcattaacgtctatatgaatatgga 123
||||||||||||| || |||||||||||||
Sbjct: 42 tagattcattaacatcaatatgaatatgga 13
