miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46567_miR319:micropc
          Length = 164

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                    
Query: 142 ggttgccttgatctttttggtcttggggtgaagggagctcc 182
           ||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 125 ggttgccttgatctttt-ggtattggagtgaagggagctcc 164




>46260_miR159:micropc
          Length = 166

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                    
Query: 142 ggttgccttgatctttttggtcttggggtgaagggagctcc 182
           ||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 126 ggttgccttgatctttt-ggtattggagtgaagggagctcc 165




>46003_miR319:micropc
          Length = 164

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                    
Query: 142 ggttgccttgatctttttggtcttggggtgaagggagctcc 182
           ||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 125 ggttgccttgatctttt-ggtattggagtgaagggagctcc 164




>45716_miR319:micropc
          Length = 164

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                    
Query: 142 ggttgccttgatctttttggtcttggggtgaagggagctcc 182
           ||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 125 ggttgccttgatctttt-ggtattggagtgaagggagctcc 164




>45689_miR319:micropc
          Length = 164

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Plus

                                                    
Query: 142 ggttgccttgatctttttggtcttggggtgaagggagctcc 182
           ||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 125 ggttgccttgatctttt-ggtattggagtgaagggagctcc 164




>46555_miR159:micropc
          Length = 162

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 37/40 (92%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                   
Query: 142 ggttgccttgatctttttggtcttggggtgaagggagctc 181
           ||||||||||||||||| ||| |||| |||||||||||||
Sbjct: 124 ggttgccttgatctttt-ggtattggagtgaagggagctc 162




>45552_miR159:micropc
          Length = 162

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 37/40 (92%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                   
Query: 142 ggttgccttgatctttttggtcttggggtgaagggagctc 181
           ||||||||||||||||| ||| |||| |||||||||||||
Sbjct: 124 ggttgccttgatctttt-ggtattggagtgaagggagctc 162




>45517_miR159:micropc
          Length = 173

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 152 atctttttggtcttggggtgaagggagctcct 183
           ||||||||||  ||||||||||||||||||||
Sbjct: 142 atctttttgggattggggtgaagggagctcct 173




>46816_miR159:micropc
          Length = 166

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 57/67 (85%), Gaps = 1/67 (1%)
 Strand = Plus / Plus

                                                                       
Query: 116 aagggtctgcatgtgctaggagatgtggttgccttgatctttttggtcttggggtgaagg 175
           |||||| ||||||  || ||||||| | || |||||||||||| ||| |||| |||||||
Sbjct: 100 aagggtttgcatgccctgggagatgagtttaccttgatctttt-ggtattggagtgaagg 158

                  
Query: 176 gagctcc 182
           |||||||
Sbjct: 159 gagctcc 165




>46781_miR159:micropc
          Length = 172

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 152 atctttttggtcttggggtgaagggagctcc 182
           ||||||||||  |||||||||||||||||||
Sbjct: 142 atctttttgggattggggtgaagggagctcc 172




>46103_miR319:micropc
          Length = 172

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 152 atctttttggtcttggggtgaagggagctcc 182
           ||||||||||  |||||||||||||||||||
Sbjct: 142 atctttttgggattggggtgaagggagctcc 172




>46067_miR159:micropc
          Length = 166

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 57/67 (85%), Gaps = 1/67 (1%)
 Strand = Plus / Plus

                                                                       
Query: 116 aagggtctgcatgtgctaggagatgtggttgccttgatctttttggtcttggggtgaagg 175
           |||||| ||||||  || ||||||| | || |||||||||||| ||| |||| |||||||
Sbjct: 100 aagggtttgcatgccctgggagatgagtttaccttgatctttt-ggtattggagtgaagg 158

                  
Query: 176 gagctcc 182
           |||||||
Sbjct: 159 gagctcc 165




>46479_miR159:micropc
          Length = 162

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 56/66 (84%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                       
Query: 116 aagggtctgcatgtgctaggagatgtggttgccttgatctttttggtcttggggtgaagg 175
           |||||| ||||||  || ||||||| | || |||||||||||| ||| |||| |||||||
Sbjct: 98  aagggtttgcatgccctgggagatgagtttaccttgatctttt-ggtattggagtgaagg 156

                 
Query: 176 gagctc 181
           ||||||
Sbjct: 157 gagctc 162




>45759_miR159:micropc
          Length = 162

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 56/66 (84%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                       
Query: 116 aagggtctgcatgtgctaggagatgtggttgccttgatctttttggtcttggggtgaagg 175
           |||||| ||||||  || ||||||| | || |||||||||||| ||| |||| |||||||
Sbjct: 98  aagggtttgcatgccctgggagatgagtttaccttgatctttt-ggtattggagtgaagg 156

                 
Query: 176 gagctc 181
           ||||||
Sbjct: 157 gagctc 162




>45527_miR159:micropc
          Length = 170

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 152 atctttttggtcttggggtgaagggagctc 181
           ||||||||||  ||||||||||||||||||
Sbjct: 141 atctttttgggattggggtgaagggagctc 170




>45950_miR159:micropc
          Length = 173

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 ttggggtgaagggagctcct 183
           ||||||||||||||||||||
Sbjct: 154 ttggggtgaagggagctcct 173