miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46270_miR437:micropc
          Length = 175

 Score =  129 bits (65), Expect = 8e-31
 Identities = 129/149 (86%), Gaps = 1/149 (0%)
 Strand = Plus / Plus

                                                                       
Query: 25  gtttttagaaaaatgcaccatcctctacaacatcaaattagtttcattaaattctctatg 84
           |||| |||||||||||||||   |||| || |||||| ||||| |||||||||||| |||
Sbjct: 28  gtttatagaaaaatgcaccaaaatctagaatatcaaactagttccattaaattctccatg 87

                                                                       
Query: 85  aaatatgtcttggtagtgcatttatgtgaacctgtagctgttaatatattttttataaaa 144
           |||||| | ||| || ||||||||| ||||| ||||| || ||||||||||||| |||||
Sbjct: 88  aaatatattttgataatgcatttat-tgaacttgtagatgataatatattttttctaaaa 146

                                        
Query: 145 acttagtcaaagttagagaagtttgactt 173
           ||||  |||||||||||||||||||||||
Sbjct: 147 acttgatcaaagttagagaagtttgactt 175



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 134 tttttataaaaacttagtcaaagttagagaagtttgactt 173
           ||||| || ||||||  ||||||||||||| |||||||||
Sbjct: 40  tttttctataaacttgatcaaagttagagaggtttgactt 1




>45607_miR437:micropc
          Length = 177

 Score = 87.7 bits (44), Expect = 3e-18
 Identities = 93/108 (86%), Gaps = 1/108 (0%)
 Strand = Plus / Plus

                                                                       
Query: 66  tttcattaaattctctatgaaatatgtcttggtagtgcatttatgtgaacctgtagctgt 125
           |||||| |||||||| ||||||||| ||||  ||||||||||||  |||| ||||| |||
Sbjct: 71  tttcataaaattctccatgaaatatttcttaatagtgcatttattcgaacttgtagatgt 130

                                                           
Query: 126 taatatattttttataaaaacttagtcaaagttagagaagtttgactt 173
           ||||||| ||||| |||||  || ||||||||||||||||| ||||||
Sbjct: 131 taatata-tttttctaaaactttggtcaaagttagagaagtctgactt 177




>46472_miR437:micropc
          Length = 180

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 134 tttttataaaaacttagtcaaagttagagaagtttgactt 173
           ||||| || |||||| || |||||||||||||||||||||
Sbjct: 141 tttttctacaaacttggttaaagttagagaagtttgactt 180




>45012_miR437:micropc
          Length = 149

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 29/30 (96%), Gaps = 1/30 (3%)
 Strand = Plus / Minus

                                         
Query: 144 aacttagtcaaagttagagaagtttgactt 173
           ||||||||||||||||| ||||||||||||
Sbjct: 29  aacttagtcaaagttag-gaagtttgactt 1



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 125 ttaatatattttttataaaaacttagtcaaagttagagaagtttgactt 173
           |||||| ||||||| |  ||||||  || ||||||||||||||||||||
Sbjct: 101 ttaatacattttttctcgaaacttgatctaagttagagaagtttgactt 149