miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46472_miR437:micropc
          Length = 180

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 70/82 (85%), Gaps = 3/82 (3%)
 Strand = Plus / Minus

                                                                       
Query: 3   gtcaaacttctctaacactgaccgagtttgtaggacaaatatatactagcatctacaata 62
           ||||||||||||||||  | ||| |||||||||   ||| |||||||| ||||  |||||
Sbjct: 178 gtcaaacttctctaactttaaccaagtttgtag---aaaaatatactaacatcagcaata 122

                                 
Query: 63  ccaaataaatgcactatcaaga 84
           |||||||| |||||||||||||
Sbjct: 121 ccaaataattgcactatcaaga 100



 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 147 tttttcaataaacttggtcaaagttagagaagtttgactt 186
           |||||| | ||||||||| |||||||||||||||||||||
Sbjct: 141 tttttctacaaacttggttaaagttagagaagtttgactt 180



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 148 ttttcaataaacttggtcaaagttagaga 176
           ||||| |||||||||||||||||| ||||
Sbjct: 39  ttttctataaacttggtcaaagttggaga 11




>46270_miR437:micropc
          Length = 175

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 145 attttttcaataaacttggtcaaagttagagaagtttgactt 186
           |||||||| | ||||||| |||||||||||||||||||||||
Sbjct: 134 attttttctaaaaacttgatcaaagttagagaagtttgactt 175



 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 147 tttttcaataaacttggtcaaagttagagaagtttgactt 186
           |||||| ||||||||| ||||||||||||| |||||||||
Sbjct: 40  tttttctataaacttgatcaaagttagagaggtttgactt 1




>46736_miR437:micropc
          Length = 144

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 59 aataccaaataaatgcactatcaa 82
          ||||||||||||||||||||||||
Sbjct: 51 aataccaaataaatgcactatcaa 74




>45607_miR437:micropc
          Length = 177

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 160 ttggtcaaagttagagaagtttgactt 186
           |||||||||||||||||||| ||||||
Sbjct: 151 ttggtcaaagttagagaagtctgactt 177




>45012_miR437:micropc
          Length = 149

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 156 aaacttggtcaaagttagagaagtttgactt 186
           ||||||| || ||||||||||||||||||||
Sbjct: 119 aaacttgatctaagttagagaagtttgactt 149