miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46270_miR437:micropc
          Length = 175

 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 144/176 (81%), Gaps = 3/176 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagtcaaacttctttaactttgtccaggtttatagaaaaacactcaaacatctagaatat 60
           ||||||||| ||| ||||||||  || |||||||||||||  | | || |||||||||||
Sbjct: 1   aagtcaaacctctctaactttgatcaagtttatagaaaaatgcaccaaaatctagaatat 60

                                                                       
Query: 61  cagatgagtttcattagattctttatgcaatatattttgatagagaatttatttgaactt 120
           || |  |||| ||||| |||||  ||| ||||||||||||||  | ||||||| ||||||
Sbjct: 61  caaactagttccattaaattctccatgaaatatattttgataatgcatttatt-gaactt 119

                                                                   
Query: 121 gtaaatgtcagtatatttt--ctaaaagcacggtcaaagttagagaagtttgactt 174
           ||| |||  | ||||||||  |||||| |  | |||||||||||||||||||||||
Sbjct: 120 gtagatgataatatattttttctaaaaacttgatcaaagttagagaagtttgactt 175



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 1   aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
           ||||||||||||| ||||||||  || |||| ||||||||
Sbjct: 175 aagtcaaacttctctaactttgatcaagtttttagaaaaa 136




>45607_miR437:micropc
          Length = 177

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 59/69 (85%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                       
Query: 107 atttatttgaacttgtaaatgtcagtatatttt-ctaaaagcacggtcaaagttagagaa 165
           ||||||| ||||||||| |||| | |||||||| ||||||    ||||||||||||||||
Sbjct: 109 atttattcgaacttgtagatgttaatatatttttctaaaactttggtcaaagttagagaa 168

                    
Query: 166 gtttgactt 174
           || ||||||
Sbjct: 169 gtctgactt 177




>46472_miR437:micropc
          Length = 180

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 154 aaagttagagaagtttgactt 174
           |||||||||||||||||||||
Sbjct: 160 aaagttagagaagtttgactt 180



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 1   aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
           ||||||||||||| |||||||  ||| |||| ||||||||
Sbjct: 180 aagtcaaacttctctaactttaaccaagtttgtagaaaaa 141




>45012_miR437:micropc
          Length = 149

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 aagttagagaagtttgactt 174
           ||||||||||||||||||||
Sbjct: 130 aagttagagaagtttgactt 149