miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46270_miR437:micropc
          Length = 175

 Score = 73.8 bits (37), Expect = 4e-14
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                        
Query: 126 gtgcatttttctataaacttggtcaaagttagagaagtttgactt 170
           ||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 45  gtgcatttttctataaacttgatcaaagttagagaggtttgactt 1



 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 131 tttttctataaacttggtcaaagttagagaagtttgactt 170
           |||||||| ||||||| |||||||||||||||||||||||
Sbjct: 136 tttttctaaaaacttgatcaaagttagagaagtttgactt 175




>46472_miR437:micropc
          Length = 180

 Score = 65.9 bits (33), Expect = 9e-12
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 130 atttttctataaacttggtcaaagttagagaagtttgactt 170
           ||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 140 atttttctacaaacttggttaaagttagagaagtttgactt 180



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 132 ttttctataaacttggtcaaagttagaga 160
           |||||||||||||||||||||||| ||||
Sbjct: 39  ttttctataaacttggtcaaagttggaga 11




>45607_miR437:micropc
          Length = 177

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 130 atttttctataaacttggtcaaagttagagaagtttgactt 170
           ||||||||| ||  |||||||||||||||||||| ||||||
Sbjct: 137 atttttctaaaactttggtcaaagttagagaagtctgactt 177



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 29  gaaaaatatattaacatctacaa 51
           |||||||||||||||||||||||
Sbjct: 143 gaaaaatatattaacatctacaa 121



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 29 gaaaaatatattaacatctacaatatcaa 57
          ||||||| ||| |||||||||||||||||
Sbjct: 36 gaaaaatgtatcaacatctacaatatcaa 64




>45012_miR437:micropc
          Length = 149

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 55/64 (85%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                       
Query: 107 tttgatgtagcagatgtttgtgcatttttctataaacttggtcaaagttagagaagtttg 166
           |||||||| |||||| || |||||  ||| ||| ||||| ||||||||||| ||||||||
Sbjct: 63  tttgatgttgcagatattagtgcagatttatatgaacttagtcaaagttag-gaagtttg 5

               
Query: 167 actt 170
           ||||
Sbjct: 4   actt 1



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 131 tttttctataaacttggtcaaagttagagaagtttgactt 170
           |||||||  ||||||| || ||||||||||||||||||||
Sbjct: 110 tttttctcgaaacttgatctaagttagagaagtttgactt 149