miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46831_miR169:micropc
Length = 144
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 3 tagccaaggatgacttgccggccgatgcctc 33
|||||||||||||||||||||||||||||||
Sbjct: 1 tagccaaggatgacttgccggccgatgcctc 31
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 101 atcggccggcaggttcttctctttggcta 129
|||| ||||||||||||||||||||||||
Sbjct: 116 atcgaccggcaggttcttctctttggcta 144
>46673_miR169:micropc
Length = 144
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 3 tagccaaggatgacttgccggccgatgcctc 33
|||||||||||||||||||||||||||||||
Sbjct: 1 tagccaaggatgacttgccggccgatgcctc 31
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 101 atcggccggcaggttcttctctttggcta 129
|||| ||||||||||||||||||||||||
Sbjct: 116 atcgaccggcaggttcttctctttggcta 144
>46509_miR169:micropc
Length = 142
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggccgatgcctc 33
||||||||||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggccgatgcctc 30
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 101 atcggccggcaggttcttctctttggct 128
|||| |||||||||||||||||||||||
Sbjct: 115 atcgaccggcaggttcttctctttggct 142
>46057_miR169:micropc
Length = 142
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggccgatgcctc 33
||||||||||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggccgatgcctc 30
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 101 atcggccggcaggttcttctctttggct 128
|||| |||||||||||||||||||||||
Sbjct: 115 atcgaccggcaggttcttctctttggct 142
>45585_miR169:micropc
Length = 142
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggccgatgcctc 33
||||||||||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggccgatgcctc 30
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 101 atcggccggcaggttcttctctttggct 128
|||| |||||||||||||||||||||||
Sbjct: 115 atcgaccggcaggttcttctctttggct 142
>46552_miR169:micropc
Length = 125
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggccg 26
|||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggccg 23
>46330_miR169:micropc
Length = 126
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggccg 26
|||||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggccg 24
>45396_miR169:micropc
Length = 125
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggccg 26
|||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggccg 23
>45107_miR169:micropc
Length = 125
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggccg 26
|||||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggccg 23
>46714_miR169:micropc
Length = 110
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>46642_miR169:micropc
Length = 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>46624_miR169:micropc
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>46485_miR169:micropc
Length = 75
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>46331_miR169:micropc
Length = 75
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>46294_miR169:micropc
Length = 110
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>46223_miR169:micropc
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>46196_miR169:micropc
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>46118_miR169:micropc
Length = 101
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>46050_miR169:micropc
Length = 75
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>46022_miR169:micropc
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>45963_miR169:micropc
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>45943_miR169:micropc
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>45806_miR169:micropc
Length = 101
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>45747_miR169:micropc
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>45313_miR169:micropc
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>45221_miR169:micropc
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>45200_miR169:micropc
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>45191_miR169:micropc
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 91 agccaaggatgacttgccggc 71
>45170_miR169:micropc
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>45039_miR169:micropc
Length = 101
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>45027_miR169:micropc
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>44923_miR169:micropc
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>44916_miR169:micropc
Length = 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>44892_miR169:micropc
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccggc 21
>44882_miR169:micropc
Length = 76
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>44852_miR169:micropc
Length = 76
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccggc 24
|||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccggc 22
>46720_miR169:micropc
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccgg 23
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccgg 20
>46140_miR169:micropc
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccgg 23
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccgg 20
>45785_miR169:micropc
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccgg 23
||||||||||||||||||||
Sbjct: 1 agccaaggatgacttgccgg 20
>45359_miR169:micropc
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccgg 23
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccgg 21
>45348_miR169:micropc
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccgg 23
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccgg 21
>45343_miR169:micropc
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 agccaaggatgacttgccgg 23
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccgg 21
