miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>46295_miR528:micropc
          Length = 103

 Score =  192 bits (97), Expect = 5e-50
 Identities = 103/103 (100%)
 Strand = Plus / Plus

                                                                       
Query: 22  tggaaggggcatgcagaggagaggtcaagatgganngaaagaaagcgatatttttcatct 81
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tggaaggggcatgcagaggagaggtcaagatgganngaaagaaagcgatatttttcatct 60

                                                      
Query: 82  cagtgcttcttctggtggcaaattcctgtgcttgcctcctcca 124
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cagtgcttcttctggtggcaaattcctgtgcttgcctcctcca 103




>46253_miR528:micropc
          Length = 117

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggaaggggcatgcagaggag 42
          |||||||||||||||||||||
Sbjct: 1  tggaaggggcatgcagaggag 21




>45655_miR528:micropc
          Length = 84

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggaaggggcatgcagaggag 42
          |||||||||||||||||||||
Sbjct: 1  tggaaggggcatgcagaggag 21




>45622_miR528:micropc
          Length = 86

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggaaggggcatgcagaggag 42
          |||||||||||||||||||||
Sbjct: 1  tggaaggggcatgcagaggag 21




>45035_miR528:micropc
          Length = 92

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggaaggggcatgcagaggag 42
          |||||||||||||||||||||
Sbjct: 1  tggaaggggcatgcagaggag 21




>44942_miR528:micropc
          Length = 82

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 22 tggaaggggcatgcagaggag 42
          |||||||||||||||||||||
Sbjct: 1  tggaaggggcatgcagaggag 21