miRNEST 2.0, an integrative microRNA resource :: BLAST
>46754_miR1439:micropc
Length = 86
Score = 105 bits (53), Expect = 5e-24
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||| |||| ||||||||||||||||||||| |||||||||| ||| ||||||
Sbjct: 6 cctccgttccagaatagatgactcaactttgtactaactttagtacaaacttgggtcatc 65
Query: 64 tattttggaacggagggagta 84
||||||||||||||||||||
Sbjct: 66 cattttggaacggagggagta 86
Score = 89.7 bits (45), Expect = 3e-19
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||||||| ||||| ||| |||||||||| |||||||||| ||||||||||
Sbjct: 81 cctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagtcatc 22
Query: 64 tattttggaacggagggagta 84
|||| ||||||||||||||||
Sbjct: 21 tattctggaacggagggagta 1
>46594_miR1439:micropc
Length = 86
Score = 105 bits (53), Expect = 5e-24
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||| |||| ||||||||||||||||||||| |||||||||| ||| ||||||
Sbjct: 6 cctccgttccagaatagatgactcaactttgtactaactttagtacaaacttgggtcatc 65
Query: 64 tattttggaacggagggagta 84
||||||||||||||||||||
Sbjct: 66 cattttggaacggagggagta 86
Score = 89.7 bits (45), Expect = 3e-19
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||||||| ||||| ||| |||||||||| |||||||||| ||||||||||
Sbjct: 81 cctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagtcatc 22
Query: 64 tattttggaacggagggagta 84
|||| ||||||||||||||||
Sbjct: 21 tattctggaacggagggagta 1
>46493_miR1439:micropc
Length = 86
Score = 105 bits (53), Expect = 5e-24
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||| |||| ||||||||||||||||||||| |||||||||| ||| ||||||
Sbjct: 6 cctccgttccagaatagatgactcaactttgtactaactttagtacaaacttgggtcatc 65
Query: 64 tattttggaacggagggagta 84
||||||||||||||||||||
Sbjct: 66 cattttggaacggagggagta 86
Score = 89.7 bits (45), Expect = 3e-19
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||||||| ||||| ||| |||||||||| |||||||||| ||||||||||
Sbjct: 81 cctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagtcatc 22
Query: 64 tattttggaacggagggagta 84
|||| ||||||||||||||||
Sbjct: 21 tattctggaacggagggagta 1
>46463_miR1439:micropc
Length = 86
Score = 105 bits (53), Expect = 5e-24
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||| |||| ||||||||||||||||||||| |||||||||| ||| ||||||
Sbjct: 6 cctccgttccagaatagatgactcaactttgtactaactttagtacaaacttgggtcatc 65
Query: 64 tattttggaacggagggagta 84
||||||||||||||||||||
Sbjct: 66 cattttggaacggagggagta 86
Score = 89.7 bits (45), Expect = 3e-19
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||||||| ||||| ||| |||||||||| |||||||||| ||||||||||
Sbjct: 81 cctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagtcatc 22
Query: 64 tattttggaacggagggagta 84
|||| ||||||||||||||||
Sbjct: 21 tattctggaacggagggagta 1
>46315_miR1439:micropc
Length = 86
Score = 105 bits (53), Expect = 5e-24
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||| |||| ||||||||||||||||||||| |||||||||| ||| ||||||
Sbjct: 6 cctccgttccagaatagatgactcaactttgtactaactttagtacaaacttgggtcatc 65
Query: 64 tattttggaacggagggagta 84
||||||||||||||||||||
Sbjct: 66 cattttggaacggagggagta 86
Score = 89.7 bits (45), Expect = 3e-19
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||||||| ||||| ||| |||||||||| |||||||||| ||||||||||
Sbjct: 81 cctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagtcatc 22
Query: 64 tattttggaacggagggagta 84
|||| ||||||||||||||||
Sbjct: 21 tattctggaacggagggagta 1
>46176_miR1439:micropc
Length = 86
Score = 105 bits (53), Expect = 5e-24
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||| |||| ||||||||||||||||||||| |||||||||| ||| ||||||
Sbjct: 6 cctccgttccagaatagatgactcaactttgtactaactttagtacaaacttgggtcatc 65
Query: 64 tattttggaacggagggagta 84
||||||||||||||||||||
Sbjct: 66 cattttggaacggagggagta 86
Score = 89.7 bits (45), Expect = 3e-19
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||||||| ||||| ||| |||||||||| |||||||||| ||||||||||
Sbjct: 81 cctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagtcatc 22
Query: 64 tattttggaacggagggagta 84
|||| ||||||||||||||||
Sbjct: 21 tattctggaacggagggagta 1
>45675_miR1439:micropc
Length = 86
Score = 105 bits (53), Expect = 5e-24
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||| |||| ||||||||||||||||||||| |||||||||| ||| ||||||
Sbjct: 6 cctccgttccagaatagatgactcaactttgtactaactttagtacaaacttgggtcatc 65
Query: 64 tattttggaacggagggagta 84
||||||||||||||||||||
Sbjct: 66 cattttggaacggagggagta 86
Score = 89.7 bits (45), Expect = 3e-19
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||||||| ||||| ||| |||||||||| |||||||||| ||||||||||
Sbjct: 81 cctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagtcatc 22
Query: 64 tattttggaacggagggagta 84
|||| ||||||||||||||||
Sbjct: 21 tattctggaacggagggagta 1
>45656_miR1439:micropc
Length = 86
Score = 105 bits (53), Expect = 5e-24
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||| |||| ||||||||||||||||||||| |||||||||| ||| ||||||
Sbjct: 6 cctccgttccagaatagatgactcaactttgtactaactttagtacaaacttgggtcatc 65
Query: 64 tattttggaacggagggagta 84
||||||||||||||||||||
Sbjct: 66 cattttggaacggagggagta 86
Score = 89.7 bits (45), Expect = 3e-19
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||||||| ||||| ||| |||||||||| |||||||||| ||||||||||
Sbjct: 81 cctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagtcatc 22
Query: 64 tattttggaacggagggagta 84
|||| ||||||||||||||||
Sbjct: 21 tattctggaacggagggagta 1
>45535_miR1439:micropc
Length = 86
Score = 105 bits (53), Expect = 5e-24
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||| |||| ||||||||||||||||||||| |||||||||| ||| ||||||
Sbjct: 6 cctccgttccagaatagatgactcaactttgtactaactttagtacaaacttgggtcatc 65
Query: 64 tattttggaacggagggagta 84
||||||||||||||||||||
Sbjct: 66 cattttggaacggagggagta 86
Score = 89.7 bits (45), Expect = 3e-19
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||||||| ||||| ||| |||||||||| |||||||||| ||||||||||
Sbjct: 81 cctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagtcatc 22
Query: 64 tattttggaacggagggagta 84
|||| ||||||||||||||||
Sbjct: 21 tattctggaacggagggagta 1
>44790_miR1439:micropc
Length = 86
Score = 105 bits (53), Expect = 5e-24
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||| |||| ||||||||||||||||||||| |||||||||| ||| ||||||
Sbjct: 6 cctccgttccagaatagatgactcaactttgtactaactttagtacaaacttgggtcatc 65
Query: 64 tattttggaacggagggagta 84
||||||||||||||||||||
Sbjct: 66 cattttggaacggagggagta 86
Score = 89.7 bits (45), Expect = 3e-19
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatc 63
||||||||||||||| ||||| ||| |||||||||| |||||||||| ||||||||||
Sbjct: 81 cctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagtcatc 22
Query: 64 tattttggaacggagggagta 84
|||| ||||||||||||||||
Sbjct: 21 tattctggaacggagggagta 1
>45797_miR1439:micropc
Length = 86
Score = 81.8 bits (41), Expect = 8e-17
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaactt-agtacaaaattgagtcatc 63
|||||||||||||||| |||| |||||||||| |||||| |||||||| ||| ||||||
Sbjct: 81 cctccgttccaaaatagatgaaccaactttgtattaactttagtacaaagttgggtcatc 22
Query: 64 tattttggaacggagggagta 84
||||||||| || ||||||||
Sbjct: 21 tattttggagcgaagggagta 1
Score = 75.8 bits (38), Expect = 5e-15
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 12 tccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatctattttg 70
||||||||| ||||| |||||||||||||| ||| |||||| ||| ||||||||||||
Sbjct: 13 tccaaaatagatgacccaactttgtactaaagttaatacaaagttggttcatctattttg 72
Query: 71 gaacggagggagta 84
||||||||||||||
Sbjct: 73 gaacggagggagta 86
>45104_miR1439:micropc
Length = 86
Score = 81.8 bits (41), Expect = 8e-17
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaactt-agtacaaaattgagtcatc 63
|||||||||||||||| |||| |||||||||| |||||| |||||||| ||| ||||||
Sbjct: 81 cctccgttccaaaatagatgaaccaactttgtattaactttagtacaaagttgggtcatc 22
Query: 64 tattttggaacggagggagta 84
||||||||| || ||||||||
Sbjct: 21 tattttggagcgaagggagta 1
Score = 75.8 bits (38), Expect = 5e-15
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 12 tccaaaatacatgactcaactttgtactaac-ttagtacaaaattgagtcatctattttg 70
||||||||| ||||| |||||||||||||| ||| |||||| ||| ||||||||||||
Sbjct: 13 tccaaaatagatgacccaactttgtactaaagttaatacaaagttggttcatctattttg 72
Query: 71 gaacggagggagta 84
||||||||||||||
Sbjct: 73 gaacggagggagta 86
>46157_miR1439:micropc
Length = 88
Score = 61.9 bits (31), Expect = 7e-11
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaacttagt--acaaaattgagtcat 62
|||| ||| ||||||| ||||| ||||||||||||| || | ||||| ||||||||
Sbjct: 6 cctctgtttcaaaatagatgacccaactttgtactacctccatttacaaagttgagtcac 65
Query: 63 ctattttggaacggagggagta 84
||||||||||||||||||||||
Sbjct: 66 ctattttggaacggagggagta 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 69/82 (84%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtacta--acttagtacaaaattgagtcat 62
|||||||||||||||| ||||||||||||||| | ||||||||| ||| |||||
Sbjct: 82 cctccgttccaaaataggtgactcaactttgtaaatggaggtagtacaaagttgggtcat 23
Query: 63 ctattttggaacggagggagta 84
|||||||| ||| |||||||||
Sbjct: 22 ctattttgaaacagagggagta 1
>44862_miR1439:micropc
Length = 88
Score = 61.9 bits (31), Expect = 7e-11
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 5 cctccgttccaaaatacatgactcaactttgtactaacttagt--acaaaattgagtcat 62
|||| ||| ||||||| ||||| ||||||||||||| || | ||||| ||||||||
Sbjct: 6 cctctgtttcaaaatagatgacccaactttgtactacctccatttacaaagttgagtcac 65
Query: 63 ctattttggaacggagggagta 84
||||||||||||||||||||||
Sbjct: 66 ctattttggaacggagggagta 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 69/82 (84%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 5 cctccgttccaaaatacatgactcaactttgtacta--acttagtacaaaattgagtcat 62
|||||||||||||||| ||||||||||||||| | ||||||||| ||| |||||
Sbjct: 82 cctccgttccaaaataggtgactcaactttgtaaatggaggtagtacaaagttgggtcat 23
Query: 63 ctattttggaacggagggagta 84
|||||||| ||| |||||||||
Sbjct: 22 ctattttgaaacagagggagta 1
>45542_miR1137:micropc
Length = 55
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 22 atgactcaactttgtactaactt 44
|||||||||||||||||||||||
Sbjct: 54 atgactcaactttgtactaactt 32
>45000_miR1137:micropc
Length = 55
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 gactcaactttgtactaactta 45
||||||||||||||||||||||
Sbjct: 55 gactcaactttgtactaactta 34
>46679_miR1439:micropc
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 tattttggaacggagggagta 84
|||||||||||||||||||||
Sbjct: 77 tattttggaacggagggagta 97
>45970_miR1439:micropc
Length = 99
Score = 42.1 bits (21), Expect = 7e-05
Identities = 49/57 (85%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 29 aactttgtactaact-tagtacaaaattgagtcatctattttggaacggagggagta 84
|||||||||||| || ||||||||| |||| || |||||||| ||||||||||||
Sbjct: 42 aactttgtactagctctagtacaaagttgatacagttattttgggacggagggagta 98
>45205_miR1439:micropc
Length = 99
Score = 42.1 bits (21), Expect = 7e-05
Identities = 49/57 (85%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 29 aactttgtactaact-tagtacaaaattgagtcatctattttggaacggagggagta 84
|||||||||||| || ||||||||| |||| || |||||||| ||||||||||||
Sbjct: 42 aactttgtactagctctagtacaaagttgatacagttattttgggacggagggagta 98
>45189_miR1439:micropc
Length = 78
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 tattttggaacggagggagta 84
|||||||||||||||||||||
Sbjct: 56 tattttggaacggagggagta 76
>46433_miR1439:micropc
Length = 153
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 65 attttggaacggagggagta 84
||||||||||||||||||||
Sbjct: 133 attttggaacggagggagta 152
