miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45797_miR1439:micropc
Length = 86
Score = 65.9 bits (33), Expect = 3e-12
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 33 aactttgtactaactttagtacaaagttgggtcatct 69
||||||||| |||||||||||||||||||||||||||
Sbjct: 57 aactttgtattaactttagtacaaagttgggtcatct 21
Score = 42.1 bits (21), Expect = 5e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 33 aactttgtactaactttagtacaaagttgggtcatct 69
||||||||||||| ||| ||||||||||| ||||||
Sbjct: 30 aactttgtactaaagttaatacaaagttggttcatct 66
>45104_miR1439:micropc
Length = 86
Score = 65.9 bits (33), Expect = 3e-12
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 33 aactttgtactaactttagtacaaagttgggtcatct 69
||||||||| |||||||||||||||||||||||||||
Sbjct: 57 aactttgtattaactttagtacaaagttgggtcatct 21
Score = 42.1 bits (21), Expect = 5e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 33 aactttgtactaactttagtacaaagttgggtcatct 69
||||||||||||| ||| ||||||||||| ||||||
Sbjct: 30 aactttgtactaaagttaatacaaagttggttcatct 66
>46754_miR1439:micropc
Length = 86
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 aactttgtactaactttagtacaaagttgggtcatc 68
||||||||||||||||||||||||| ||||||||||
Sbjct: 30 aactttgtactaactttagtacaaacttgggtcatc 65
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagatgactcaacttggtactaacttt 27
||||||||||||||| |||||||||||
Sbjct: 20 tagatgactcaactttgtactaacttt 46
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 36 tttgtactaactttagtacaaagttgggtcatct 69
|||||||||| |||||||||||||| |||||||
Sbjct: 54 tttgtactaaagttagtacaaagttgagtcatct 21
>46594_miR1439:micropc
Length = 86
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 aactttgtactaactttagtacaaagttgggtcatc 68
||||||||||||||||||||||||| ||||||||||
Sbjct: 30 aactttgtactaactttagtacaaacttgggtcatc 65
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagatgactcaacttggtactaacttt 27
||||||||||||||| |||||||||||
Sbjct: 20 tagatgactcaactttgtactaacttt 46
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 36 tttgtactaactttagtacaaagttgggtcatct 69
|||||||||| |||||||||||||| |||||||
Sbjct: 54 tttgtactaaagttagtacaaagttgagtcatct 21
>46493_miR1439:micropc
Length = 86
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 aactttgtactaactttagtacaaagttgggtcatc 68
||||||||||||||||||||||||| ||||||||||
Sbjct: 30 aactttgtactaactttagtacaaacttgggtcatc 65
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagatgactcaacttggtactaacttt 27
||||||||||||||| |||||||||||
Sbjct: 20 tagatgactcaactttgtactaacttt 46
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 36 tttgtactaactttagtacaaagttgggtcatct 69
|||||||||| |||||||||||||| |||||||
Sbjct: 54 tttgtactaaagttagtacaaagttgagtcatct 21
>46463_miR1439:micropc
Length = 86
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 aactttgtactaactttagtacaaagttgggtcatc 68
||||||||||||||||||||||||| ||||||||||
Sbjct: 30 aactttgtactaactttagtacaaacttgggtcatc 65
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagatgactcaacttggtactaacttt 27
||||||||||||||| |||||||||||
Sbjct: 20 tagatgactcaactttgtactaacttt 46
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 36 tttgtactaactttagtacaaagttgggtcatct 69
|||||||||| |||||||||||||| |||||||
Sbjct: 54 tttgtactaaagttagtacaaagttgagtcatct 21
>46315_miR1439:micropc
Length = 86
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 aactttgtactaactttagtacaaagttgggtcatc 68
||||||||||||||||||||||||| ||||||||||
Sbjct: 30 aactttgtactaactttagtacaaacttgggtcatc 65
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagatgactcaacttggtactaacttt 27
||||||||||||||| |||||||||||
Sbjct: 20 tagatgactcaactttgtactaacttt 46
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 36 tttgtactaactttagtacaaagttgggtcatct 69
|||||||||| |||||||||||||| |||||||
Sbjct: 54 tttgtactaaagttagtacaaagttgagtcatct 21
>46176_miR1439:micropc
Length = 86
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 aactttgtactaactttagtacaaagttgggtcatc 68
||||||||||||||||||||||||| ||||||||||
Sbjct: 30 aactttgtactaactttagtacaaacttgggtcatc 65
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagatgactcaacttggtactaacttt 27
||||||||||||||| |||||||||||
Sbjct: 20 tagatgactcaactttgtactaacttt 46
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 36 tttgtactaactttagtacaaagttgggtcatct 69
|||||||||| |||||||||||||| |||||||
Sbjct: 54 tttgtactaaagttagtacaaagttgagtcatct 21
>45675_miR1439:micropc
Length = 86
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 aactttgtactaactttagtacaaagttgggtcatc 68
||||||||||||||||||||||||| ||||||||||
Sbjct: 30 aactttgtactaactttagtacaaacttgggtcatc 65
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagatgactcaacttggtactaacttt 27
||||||||||||||| |||||||||||
Sbjct: 20 tagatgactcaactttgtactaacttt 46
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 36 tttgtactaactttagtacaaagttgggtcatct 69
|||||||||| |||||||||||||| |||||||
Sbjct: 54 tttgtactaaagttagtacaaagttgagtcatct 21
>45656_miR1439:micropc
Length = 86
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 aactttgtactaactttagtacaaagttgggtcatc 68
||||||||||||||||||||||||| ||||||||||
Sbjct: 30 aactttgtactaactttagtacaaacttgggtcatc 65
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagatgactcaacttggtactaacttt 27
||||||||||||||| |||||||||||
Sbjct: 20 tagatgactcaactttgtactaacttt 46
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 36 tttgtactaactttagtacaaagttgggtcatct 69
|||||||||| |||||||||||||| |||||||
Sbjct: 54 tttgtactaaagttagtacaaagttgagtcatct 21
>45535_miR1439:micropc
Length = 86
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 aactttgtactaactttagtacaaagttgggtcatc 68
||||||||||||||||||||||||| ||||||||||
Sbjct: 30 aactttgtactaactttagtacaaacttgggtcatc 65
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagatgactcaacttggtactaacttt 27
||||||||||||||| |||||||||||
Sbjct: 20 tagatgactcaactttgtactaacttt 46
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 36 tttgtactaactttagtacaaagttgggtcatct 69
|||||||||| |||||||||||||| |||||||
Sbjct: 54 tttgtactaaagttagtacaaagttgagtcatct 21
>44790_miR1439:micropc
Length = 86
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 aactttgtactaactttagtacaaagttgggtcatc 68
||||||||||||||||||||||||| ||||||||||
Sbjct: 30 aactttgtactaactttagtacaaacttgggtcatc 65
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagatgactcaacttggtactaacttt 27
||||||||||||||| |||||||||||
Sbjct: 20 tagatgactcaactttgtactaacttt 46
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 36 tttgtactaactttagtacaaagttgggtcatct 69
|||||||||| |||||||||||||| |||||||
Sbjct: 54 tttgtactaaagttagtacaaagttgagtcatct 21
>45223_miR1137:micropc
Length = 51
Score = 60.0 bits (30), Expect = 2e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 29 tactaactttgtactaactttagtacaaagttgggtca 66
||||||||||||||||| |||||||||||||||||||
Sbjct: 14 tactaactttgtactaaagttagtacaaagttgggtca 51
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 33 aactttgtactaactttagtacaaagtt 60
||||||||||||||||||||||||||||
Sbjct: 45 aactttgtactaactttagtacaaagtt 18
>46102_miR1137:micropc
Length = 51
Score = 52.0 bits (26), Expect = 5e-08
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 22 aactttgtactaactttgtactaactttagtacaaagt 59
|||||| ||||||||||||||||| ||||||||||||
Sbjct: 45 aactttttactaactttgtactaaggttagtacaaagt 8
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 34 actttgtactaactttagtacaaagtt 60
||||||||||||| |||||||||||||
Sbjct: 8 actttgtactaaccttagtacaaagtt 34
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 5 tgactcaacttggtactaactttgtactaa 34
||||||||||| |||||||||||||||||
Sbjct: 51 tgactcaactttttactaactttgtactaa 22
>46347_miR1137:micropc
Length = 55
Score = 48.1 bits (24), Expect = 8e-07
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 22 aactttgtactaactttgtactaactttagtacaaa 57
||||||||||||| |||||||||| ||||||||||
Sbjct: 47 aactttgtactaattttgtactaaagttagtacaaa 12
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 36 tttgtactaactttagtacaaa 57
||||||||||||||||||||||
Sbjct: 12 tttgtactaactttagtacaaa 33
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 ttagtacaaagttgggtcatc 68
|||||||||||||||||||||
Sbjct: 35 ttagtacaaagttgggtcatc 55
>45970_miR1439:micropc
Length = 99
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 32 taactttgtactaactttagtacaaagttg 61
||||||||||||| || |||||||||||||
Sbjct: 41 taactttgtactagctctagtacaaagttg 70
>45205_miR1439:micropc
Length = 99
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 32 taactttgtactaactttagtacaaagttg 61
||||||||||||| || |||||||||||||
Sbjct: 41 taactttgtactagctctagtacaaagttg 70
>46157_miR1439:micropc
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 49 tagtacaaagttgggtcatct 69
|||||||||||||||||||||
Sbjct: 41 tagtacaaagttgggtcatct 21
>45542_miR1137:micropc
Length = 55
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 33 aactttgtactaactttagta 53
|||||||||||||||||||||
Sbjct: 47 aactttgtactaactttagta 27
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 3 gatgactcaacttggtactaacttt 27
||||||||||||| |||||||||||
Sbjct: 55 gatgactcaactttgtactaacttt 31
Score = 40.1 bits (20), Expect = 2e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 29 tactaactttgtactaactttagtacaaagttgggtcatc 68
|||||| ||| |||||| |||||||||||||| ||||||
Sbjct: 16 tactaattttttactaaagttagtacaaagttgagtcatc 55
>44862_miR1439:micropc
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 49 tagtacaaagttgggtcatct 69
|||||||||||||||||||||
Sbjct: 41 tagtacaaagttgggtcatct 21
