miRNEST 2.0, an integrative microRNA resource :: BLAST
>45387_miR1439:micropc
Length = 109
Score = 129 bits (65), Expect = 6e-31
Identities = 98/109 (89%)
Strand = Plus / Plus
Query: 19 gtactccctccgtttcgaattacttgtcgcaggtatggatgtatctagatgtattttagt 78
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 gtactccctccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagt 60
Query: 79 tctatatacattcatttctgcgacaattaatttggaacggaaggagtat 127
| || | |||| |||||| |||| | |||||||||||||| |||||||
Sbjct: 61 tttagacacatccatttcaacgacgagtaatttggaacggagggagtat 109
>45292_miR1439:micropc
Length = 112
Score = 125 bits (63), Expect = 1e-29
Identities = 101/111 (90%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 19 gtactccctccgtttcgaattacttgtcgcaggtatggatgtatctagatgtatttta-g 77
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gtactccctctattccgaattacttgtcgcaggtatggatgtatctagatgtattttagg 60
Query: 78 ttc-tatatacattcatttctgcgacaattaatttggaacggaaggagtat 127
||| || |||||| |||||||||||| | |||||||||||||| |||||||
Sbjct: 61 ttcttagatacatccatttctgcgacgagtaatttggaacggagggagtat 111
Score = 52.0 bits (26), Expect = 1e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 20 tactccctccgtttcgaattacttgtcgcaggtatggatgtatcta 65
||||||||||||| | ||||||| ||||||| |||||||||||||
Sbjct: 110 tactccctccgttccaaattactcgtcgcagaaatggatgtatcta 65
>45862_miR1135:micropc
Length = 93
Score = 113 bits (57), Expect = 4e-26
Identities = 84/93 (90%)
Strand = Plus / Minus
Query: 27 tccgtttcgaattacttgtcgcaggtatggatgtatctagatgtattttagttctatata 86
|||||| |||||||||||||||| |||||||||||||||||||||||||| ||||| |||
Sbjct: 93 tccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttaattctagata 34
Query: 87 cattcatttctgcgacaattaatttggaacgga 119
||| ||||| ||||| | ||||||||||||||
Sbjct: 33 catccattttagcgacgagtaatttggaacgga 1
>45703_miR1135:micropc
Length = 93
Score = 113 bits (57), Expect = 4e-26
Identities = 84/93 (90%)
Strand = Plus / Minus
Query: 27 tccgtttcgaattacttgtcgcaggtatggatgtatctagatgtattttagttctatata 86
|||||| |||||||||||||||| |||||||||||||||||||||||||| ||||| |||
Sbjct: 93 tccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttaattctagata 34
Query: 87 cattcatttctgcgacaattaatttggaacgga 119
||| ||||| ||||| | ||||||||||||||
Sbjct: 33 catccattttagcgacgagtaatttggaacgga 1
>45493_miR1135:micropc
Length = 93
Score = 113 bits (57), Expect = 4e-26
Identities = 84/93 (90%)
Strand = Plus / Minus
Query: 27 tccgtttcgaattacttgtcgcaggtatggatgtatctagatgtattttagttctatata 86
|||||| |||||||||||||||| |||||||||||||||||||||||||| ||||| |||
Sbjct: 93 tccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttaattctagata 34
Query: 87 cattcatttctgcgacaattaatttggaacgga 119
||| ||||| ||||| | ||||||||||||||
Sbjct: 33 catccattttagcgacgagtaatttggaacgga 1
>46322_miR1135:micropc
Length = 93
Score = 105 bits (53), Expect = 9e-24
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 35 gaattacttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcatt 94
||||||||||||||| |||||||||| ||||||||||||||||||||| |||||| ||||
Sbjct: 85 gaattacttgtcgcacgtatggatgtttctagatgtattttagttctagatacatccatt 26
Query: 95 tctgcgacaattaatttggaacgga 119
| ||||| | ||||||||||||||
Sbjct: 25 ttagcgacgagtaatttggaacgga 1
>45304_miR1128:micropc
Length = 108
Score = 101 bits (51), Expect = 1e-22
Identities = 93/107 (86%)
Strand = Plus / Minus
Query: 20 tactccctccgtttcgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 79
||||||||||||| ||||||||||||| || ||| |||||||||||||||||||||||
Sbjct: 108 tactccctccgttcggaattacttgtcgtagaaatgaatgtatctagatgtattttagtt 49
Query: 80 ctatatacattcatttctgcgacaattaatttggaacggaaggagta 126
||| |||||| ||||| | ||||| |||||| ||||||| ||||||
Sbjct: 48 ctagatacatccattttcgagacaagtaatttcgaacggagggagta 2
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 79 tctatatacattcatttctgcgacaattaatttggaacggaaggagta 126
|||| |||||||||||||| |||||| ||||| ||||||| ||||||
Sbjct: 61 tctagatacattcatttctacgacaagtaattccgaacggagggagta 108
>46513_miR1136:micropc
Length = 63
Score = 97.6 bits (49), Expect = 2e-21
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcatttctgcga 101
|||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||
Sbjct: 1 ttgtcgcaggtatggatgcatctagatgtattttagttctagatacatccatttctgcga 60
Query: 102 c 102
|
Sbjct: 61 c 61
>45512_miR1136:micropc
Length = 63
Score = 97.6 bits (49), Expect = 2e-21
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcatttctgcga 101
||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 1 ttgtcgcaggtatagatgtatctagatgtattttagttctagatacatccatttctgcga 60
Query: 102 c 102
|
Sbjct: 61 c 61
>45051_miR1135:micropc
Length = 93
Score = 97.6 bits (49), Expect = 2e-21
Identities = 82/93 (88%)
Strand = Plus / Minus
Query: 27 tccgtttcgaattacttgtcgcaggtatggatgtatctagatgtattttagttctatata 86
|||||| ||||||||| |||||| |||||||||||||||||||||||||||||| |||
Sbjct: 93 tccgttccgaattactcgtcgcaaaaatggatgtatctagatgtattttagttctagata 34
Query: 87 cattcatttctgcgacaattaatttggaacgga 119
||| |||||||| ||| | ||||||| ||||||
Sbjct: 33 catccatttctgagacgagtaatttgaaacgga 1
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 27 tccgtttcgaattacttgtcgcaggtatggatgtatctaga 67
|||||||| ||||||| ||| ||| |||||||||||||||
Sbjct: 1 tccgtttcaaattactcgtctcagaaatggatgtatctaga 41
>45649_miR1135:micropc
Length = 95
Score = 89.7 bits (45), Expect = 5e-19
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 36 aattacttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcattt 95
||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 86 aattacttgtcgcagaaatggatgtatctagatgtattttagttctagatacatccattt 27
Query: 96 c 96
|
Sbjct: 26 c 26
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 79 tctatatacattcatttctgcgacaattaatttggaacgga 119
|||| |||||| |||||||||||||| |||||| |||||||
Sbjct: 55 tctagatacatccatttctgcgacaagtaatttcgaacgga 95
>45250_miR1136:micropc
Length = 63
Score = 89.7 bits (45), Expect = 5e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcatttctgcga 101
||||| ||||||||||||||||||||||||||||| ||||| |||||| |||||||||||
Sbjct: 1 ttgtcacaggtatggatgtatctagatgtattttaattctagatacatccatttctgcga 60
Query: 102 c 102
|
Sbjct: 61 c 61
>45643_miR1136:micropc
Length = 63
Score = 79.8 bits (40), Expect = 5e-16
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcat 93
||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 ttgtcgcagaaatggatgtatctagatgtattttagttctagatacattcat 52
>46810_miR1136:micropc
Length = 65
Score = 77.8 bits (39), Expect = 2e-15
Identities = 59/63 (93%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 42 ttgtcgcaggtatggatgtatctagatgtatttta-gttc-tatatacattcatttctgc 99
||||||||||||||||||||||||||||||||||| |||| || |||||| |||||||||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatccatttctgc 60
Query: 100 gac 102
|||
Sbjct: 61 gac 63
>46139_miR1136:micropc
Length = 65
Score = 77.8 bits (39), Expect = 2e-15
Identities = 59/63 (93%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 42 ttgtcgcaggtatggatgtatctagatgtatttta-gttc-tatatacattcatttctgc 99
||||||||||||||||||||||||||||||||||| |||| || |||||| |||||||||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatccatttctgc 60
Query: 100 gac 102
|||
Sbjct: 61 gac 63
>45578_miR1136:micropc
Length = 65
Score = 77.8 bits (39), Expect = 2e-15
Identities = 59/63 (93%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 42 ttgtcgcaggtatggatgtatctagatgtatttta-gttc-tatatacattcatttctgc 99
||||||||||||||||||||||||||||||||||| |||| || |||||| |||||||||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatccatttctgc 60
Query: 100 gac 102
|||
Sbjct: 61 gac 63
>45217_miR1136:micropc
Length = 65
Score = 77.8 bits (39), Expect = 2e-15
Identities = 59/63 (93%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 42 ttgtcgcaggtatggatgtatctagatgtatttta-gttc-tatatacattcatttctgc 99
||||||||||||||||||||||||||||||||||| |||| || |||||| |||||||||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatccatttctgc 60
Query: 100 gac 102
|||
Sbjct: 61 gac 63
>45029_miR1136:micropc
Length = 65
Score = 77.8 bits (39), Expect = 2e-15
Identities = 59/63 (93%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 42 ttgtcgcaggtatggatgtatctagatgtatttta-gttc-tatatacattcatttctgc 99
||||||||||||||||||||||||||||||||||| |||| || |||||| |||||||||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatccatttctgc 60
Query: 100 gac 102
|||
Sbjct: 61 gac 63
>45244_miR1136:micropc
Length = 63
Score = 73.8 bits (37), Expect = 3e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcatttctg 98
||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||||
Sbjct: 1 ttgtcacaggtatggatatatctagatgtattttagttctggatacatccatttctg 57
>46650_miR1128:micropc
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcattt 95
|||||| ||| || |||||||||||||||||||| |||||| ||||||||||||
Sbjct: 95 ttgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>46443_miR1128:micropc
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcattt 95
|||||| ||| || |||||||||||||||||||| |||||| ||||||||||||
Sbjct: 95 ttgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>46231_miR1128:micropc
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcattt 95
|||||| ||| || |||||||||||||||||||| |||||| ||||||||||||
Sbjct: 95 ttgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>46218_miR1128:micropc
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcattt 95
|||||| ||| || |||||||||||||||||||| |||||| ||||||||||||
Sbjct: 95 ttgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>46180_miR1128:micropc
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcattt 95
|||||| ||| || |||||||||||||||||||| |||||| ||||||||||||
Sbjct: 95 ttgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>46136_miR1128:micropc
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcattt 95
|||||| ||| || |||||||||||||||||||| |||||| ||||||||||||
Sbjct: 95 ttgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>45836_miR1128:micropc
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcattt 95
|||||| ||| || |||||||||||||||||||| |||||| ||||||||||||
Sbjct: 95 ttgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>45824_miR1128:micropc
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcattt 95
|||||| ||| || |||||||||||||||||||| |||||| ||||||||||||
Sbjct: 95 ttgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>45818_miR1128:micropc
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcattt 95
|||||| ||| || |||||||||||||||||||| |||||| ||||||||||||
Sbjct: 95 ttgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>45729_miR1128:micropc
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcattt 95
|||||| ||| || |||||||||||||||||||| |||||| ||||||||||||
Sbjct: 95 ttgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>45575_miR1128:micropc
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcattt 95
|||||| ||| || |||||||||||||||||||| |||||| ||||||||||||
Sbjct: 95 ttgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>45466_miR1128:micropc
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcattt 95
|||||| ||| || |||||||||||||||||||| |||||| ||||||||||||
Sbjct: 95 ttgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>45150_miR1128:micropc
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcattt 95
|||||| ||| || |||||||||||||||||||| |||||| ||||||||||||
Sbjct: 95 ttgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>45094_miR1128:micropc
Length = 114
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 42 ttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcattt 95
|||||| ||| || |||||||||||||||||||| |||||| ||||||||||||
Sbjct: 95 ttgtcggaggaatagatgtatctagatgtattttggttctagatacattcattt 42
>46065_miR1135:micropc
Length = 89
Score = 65.9 bits (33), Expect = 8e-12
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 35 gaattacttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcatt 94
||||||||||||||| ||||||||||||||| |||||||| ||||| |||||| ||||
Sbjct: 83 gaattacttgtcgcataaatggatgtatctagacgtattttaattctagatacatccatt 24
Query: 95 t 95
|
Sbjct: 23 t 23
>46822_miR1135:micropc
Length = 93
Score = 63.9 bits (32), Expect = 3e-11
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 35 gaattacttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcatt 94
|||||||||||||||| || |||||||||||| ||||||| ||||| |||||| ||||
Sbjct: 85 gaattacttgtcgcagaaatagatgtatctagacatattttaattctagatacatccatt 26
Query: 95 tctgcgacaattaatt 110
|| | ||||| |||||
Sbjct: 25 tccgagacaagtaatt 10
>45199_miR1135:micropc
Length = 93
Score = 63.9 bits (32), Expect = 3e-11
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 35 gaattacttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcatt 94
|||||||||||||||| || |||||||||||| ||||||| ||||| |||||| ||||
Sbjct: 85 gaattacttgtcgcagaaatagatgtatctagacatattttaattctagatacatccatt 26
Query: 95 tctgcgacaattaatt 110
|| | ||||| |||||
Sbjct: 25 tccgagacaagtaatt 10
>46044_miR1128:micropc
Length = 128
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 55 ggatgtatctagatgtattttagttctatatacat 89
|||||||||||||||||||||||||||| ||||||
Sbjct: 83 ggatgtatctagatgtattttagttctagatacat 49
>45461_miR1128:micropc
Length = 128
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 55 ggatgtatctagatgtattttagttctatatacat 89
|||||||||||||||||||||||||||| ||||||
Sbjct: 83 ggatgtatctagatgtattttagttctagatacat 49
>45233_miR1128:micropc
Length = 133
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 55 ggatgtatctagatgtattttagttctatatacat 89
|||||||||||||||||||||||||||| ||||||
Sbjct: 49 ggatgtatctagatgtattttagttctaaatacat 83
>44841_miR1128:micropc
Length = 128
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 55 ggatgtatctagatgtattttagttctatatacat 89
|||||||||||||||||||||||||||| ||||||
Sbjct: 83 ggatgtatctagatgtattttagttctagatacat 49
>46174_miR1135:micropc
Length = 93
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 60 tatctagatgtattttagttctatatacattcatttc 96
||||||||||||||||||||||| |||| | ||||||
Sbjct: 60 tatctagatgtattttagttctaaatacgtccatttc 24
>45241_miR1122:micropc
Length = 55
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 tggatgtatctagatgtattttagtt 79
||||||||||| ||||||||||||||
Sbjct: 9 tggatgtatctggatgtattttagtt 34
>45155_miR1135:micropc
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 35 gaattacttgtcgcaggtatggatgtatctagatgtattttagttctatatacattcatt 94
||||||||||||||| ||| ||||||||||| | ||||| ||||| |||||| ||||
Sbjct: 85 gaattacttgtcgcaaaaatgaatgtatctagacgccttttaattctagatacatccatt 26
Query: 95 t 95
|
Sbjct: 25 t 25
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 79 tctatatacattcatttctgcgacaattaatttggaacgga 119
|||| |||||||||||| |||||||| ||||| |||||||
Sbjct: 53 tctagatacattcatttttgcgacaagtaattccgaacgga 93
