miRNEST 2.0, an integrative microRNA resource :: BLAST
>45292_miR1439:micropc
Length = 112
Score = 87.7 bits (44), Expect = 2e-18
Identities = 85/94 (90%), Gaps = 5/94 (5%)
Strand = Plus / Plus
Query: 25 gaattacttgtcgcaggtatggatgtatctagatgt-ntttag--tc-taaatacatcca 80
|||||||||||||||||||||||||||||||||||| ||||| || || |||||||||
Sbjct: 17 gaattacttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatcca 76
Query: 81 -tcctgcgacgagtaatttggaagggagggagta 113
| |||||||||||||||||||| ||||||||||
Sbjct: 77 tttctgcgacgagtaatttggaacggagggagta 110
Score = 40.1 bits (20), Expect = 4e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 12 ctccctccgtcctgaattacttgtcgcaggtatggatgtatcta 55
|||||||||| | ||||||| ||||||| |||||||||||||
Sbjct: 108 ctccctccgttccaaattactcgtcgcagaaatggatgtatcta 65
>45862_miR1135:micropc
Length = 93
Score = 77.8 bits (39), Expect = 2e-15
Identities = 72/81 (88%), Gaps = 3/81 (3%)
Strand = Plus / Minus
Query: 25 gaattacttgtcgcaggtatggatgtatctagatgtnttt--agtctaaatacatccatc 82
||||||||||||||| |||||||||||||||||||| ||| | |||| ||||||||||
Sbjct: 85 gaattacttgtcgcacgtatggatgtatctagatgtattttaattctagatacatccatt 26
Query: 83 ct-gcgacgagtaatttggaa 102
| ||||||||||||||||||
Sbjct: 25 ttagcgacgagtaatttggaa 5
>45703_miR1135:micropc
Length = 93
Score = 77.8 bits (39), Expect = 2e-15
Identities = 72/81 (88%), Gaps = 3/81 (3%)
Strand = Plus / Minus
Query: 25 gaattacttgtcgcaggtatggatgtatctagatgtnttt--agtctaaatacatccatc 82
||||||||||||||| |||||||||||||||||||| ||| | |||| ||||||||||
Sbjct: 85 gaattacttgtcgcacgtatggatgtatctagatgtattttaattctagatacatccatt 26
Query: 83 ct-gcgacgagtaatttggaa 102
| ||||||||||||||||||
Sbjct: 25 ttagcgacgagtaatttggaa 5
>45493_miR1135:micropc
Length = 93
Score = 77.8 bits (39), Expect = 2e-15
Identities = 72/81 (88%), Gaps = 3/81 (3%)
Strand = Plus / Minus
Query: 25 gaattacttgtcgcaggtatggatgtatctagatgtnttt--agtctaaatacatccatc 82
||||||||||||||| |||||||||||||||||||| ||| | |||| ||||||||||
Sbjct: 85 gaattacttgtcgcacgtatggatgtatctagatgtattttaattctagatacatccatt 26
Query: 83 ct-gcgacgagtaatttggaa 102
| ||||||||||||||||||
Sbjct: 25 ttagcgacgagtaatttggaa 5
>46322_miR1135:micropc
Length = 93
Score = 75.8 bits (38), Expect = 7e-15
Identities = 79/89 (88%), Gaps = 3/89 (3%)
Strand = Plus / Minus
Query: 17 tccgtcctgaattacttgtcgcaggtatggatgtatctagatgt-ntttag-tctaaata 74
||||| ||||||||||||||||| |||||||||| ||||||||| ||||| |||| |||
Sbjct: 93 tccgttctgaattacttgtcgcacgtatggatgtttctagatgtattttagttctagata 34
Query: 75 catccatcct-gcgacgagtaatttggaa 102
||||||| | ||||||||||||||||||
Sbjct: 33 catccattttagcgacgagtaatttggaa 5
>45387_miR1439:micropc
Length = 109
Score = 75.8 bits (38), Expect = 7e-15
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 12 ctccctccgtcctgaattacttgtcgcaggtatggatgtatctagatgtnttt 64
|||||||||| | ||||||||||||||| |||||||||||||||||||| |||
Sbjct: 4 ctccctccgttccgaattacttgtcgcacgtatggatgtatctagatgtattt 56
Score = 42.1 bits (21), Expect = 9e-05
Identities = 43/49 (87%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 67 tctaaatacatccatcc-tgcgacgagtaatttggaagggagggagtac 114
|||| |||||||||| | |||||| ||||||| |||| |||||||||||
Sbjct: 49 tctagatacatccatacgtgcgacaagtaattcggaacggagggagtac 1
>46810_miR1136:micropc
Length = 65
Score = 60.0 bits (30), Expect = 4e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 32 ttgtcgcaggtatggatgtatctagatgtnttt 64
||||||||||||||||||||||||||||| |||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattt 33
>46139_miR1136:micropc
Length = 65
Score = 60.0 bits (30), Expect = 4e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 32 ttgtcgcaggtatggatgtatctagatgtnttt 64
||||||||||||||||||||||||||||| |||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattt 33
>45578_miR1136:micropc
Length = 65
Score = 60.0 bits (30), Expect = 4e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 32 ttgtcgcaggtatggatgtatctagatgtnttt 64
||||||||||||||||||||||||||||| |||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattt 33
>45217_miR1136:micropc
Length = 65
Score = 60.0 bits (30), Expect = 4e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 32 ttgtcgcaggtatggatgtatctagatgtnttt 64
||||||||||||||||||||||||||||| |||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattt 33
>45029_miR1136:micropc
Length = 65
Score = 60.0 bits (30), Expect = 4e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 32 ttgtcgcaggtatggatgtatctagatgtnttt 64
||||||||||||||||||||||||||||| |||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattt 33
>45649_miR1135:micropc
Length = 95
Score = 56.0 bits (28), Expect = 6e-09
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 26 aattacttgtcgcaggtatggatgtatctagatgtnttt 64
||||||||||||||| |||||||||||||||||| |||
Sbjct: 86 aattacttgtcgcagaaatggatgtatctagatgtattt 48
>46513_miR1136:micropc
Length = 63
Score = 52.0 bits (26), Expect = 1e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 32 ttgtcgcaggtatggatgtatctagatgtnttt 64
|||||||||||||||||| |||||||||| |||
Sbjct: 1 ttgtcgcaggtatggatgcatctagatgtattt 33
>45512_miR1136:micropc
Length = 63
Score = 52.0 bits (26), Expect = 1e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 32 ttgtcgcaggtatggatgtatctagatgtnttt 64
||||||||||||| ||||||||||||||| |||
Sbjct: 1 ttgtcgcaggtatagatgtatctagatgtattt 33
>45304_miR1128:micropc
Length = 108
Score = 52.0 bits (26), Expect = 1e-07
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 12 ctccctccgtcctgaattacttgtcgcaggtatggatgtatctagatgtnttt 64
|||||||||| | ||||||||||||| || ||| |||||||||||||| |||
Sbjct: 106 ctccctccgttcggaattacttgtcgtagaaatgaatgtatctagatgtattt 54
>45250_miR1136:micropc
Length = 63
Score = 52.0 bits (26), Expect = 1e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 32 ttgtcgcaggtatggatgtatctagatgtnttt 64
||||| ||||||||||||||||||||||| |||
Sbjct: 1 ttgtcacaggtatggatgtatctagatgtattt 33
>45051_miR1135:micropc
Length = 93
Score = 46.1 bits (23), Expect = 6e-06
Identities = 67/78 (85%), Gaps = 3/78 (3%)
Strand = Plus / Minus
Query: 25 gaattacttgtcgcaggtatggatgtatctagatgt-ntttag-tctaaatacatcca-t 81
|||||||| |||||| |||||||||||||||||| ||||| |||| ||||||||| |
Sbjct: 85 gaattactcgtcgcaaaaatggatgtatctagatgtattttagttctagatacatccatt 26
Query: 82 cctgcgacgagtaatttg 99
||| |||||||||||||
Sbjct: 25 tctgagacgagtaatttg 8
>45643_miR1136:micropc
Length = 63
Score = 44.1 bits (22), Expect = 2e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 32 ttgtcgcaggtatggatgtatctagatgtnttt 64
||||||||| |||||||||||||||||| |||
Sbjct: 1 ttgtcgcagaaatggatgtatctagatgtattt 33
>45244_miR1136:micropc
Length = 63
Score = 44.1 bits (22), Expect = 2e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 32 ttgtcgcaggtatggatgtatctagatgtnttt 64
||||| ||||||||||| ||||||||||| |||
Sbjct: 1 ttgtcacaggtatggatatatctagatgtattt 33
>46822_miR1135:micropc
Length = 93
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 25 gaattacttgtcgcaggtatggatgtatctaga 57
|||||||||||||||| || ||||||||||||
Sbjct: 85 gaattacttgtcgcagaaatagatgtatctaga 53
>46065_miR1135:micropc
Length = 89
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 25 gaattacttgtcgcaggtatggatgtatctaga 57
||||||||||||||| |||||||||||||||
Sbjct: 83 gaattacttgtcgcataaatggatgtatctaga 51
>45199_miR1135:micropc
Length = 93
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 25 gaattacttgtcgcaggtatggatgtatctaga 57
|||||||||||||||| || ||||||||||||
Sbjct: 85 gaattacttgtcgcagaaatagatgtatctaga 53
