miRNEST 2.0, an integrative microRNA resource :: BLAST
>45862_miR1135:micropc
Length = 93
Score = 129 bits (65), Expect = 5e-31
Identities = 86/93 (92%)
Strand = Plus / Minus
Query: 17 tccgtttcgaattatttgtcacaggtatggatgtatctagatgtattttaattctagata 76
|||||| ||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 93 tccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttaattctagata 34
Query: 77 catccatttctgcgacgagtaatttagaacgga 109
||||||||| |||||||||||||| |||||||
Sbjct: 33 catccattttagcgacgagtaatttggaacgga 1
>45703_miR1135:micropc
Length = 93
Score = 129 bits (65), Expect = 5e-31
Identities = 86/93 (92%)
Strand = Plus / Minus
Query: 17 tccgtttcgaattatttgtcacaggtatggatgtatctagatgtattttaattctagata 76
|||||| ||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 93 tccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttaattctagata 34
Query: 77 catccatttctgcgacgagtaatttagaacgga 109
||||||||| |||||||||||||| |||||||
Sbjct: 33 catccattttagcgacgagtaatttggaacgga 1
>45493_miR1135:micropc
Length = 93
Score = 129 bits (65), Expect = 5e-31
Identities = 86/93 (92%)
Strand = Plus / Minus
Query: 17 tccgtttcgaattatttgtcacaggtatggatgtatctagatgtattttaattctagata 76
|||||| ||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 93 tccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttaattctagata 34
Query: 77 catccatttctgcgacgagtaatttagaacgga 109
||||||||| |||||||||||||| |||||||
Sbjct: 33 catccattttagcgacgagtaatttggaacgga 1
>45387_miR1439:micropc
Length = 109
Score = 127 bits (64), Expect = 2e-30
Identities = 94/104 (90%)
Strand = Plus / Plus
Query: 14 ccctccgtttcgaattatttgtcacaggtatggatgtatctagatgtattttaattctag 73
||||||||| ||||||| ||||| || |||||||||||||||||||||||||| || |||
Sbjct: 6 ccctccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagttttag 65
Query: 74 atacatccatttctgcgacgagtaatttagaacggagggagtat 117
| ||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 66 acacatccatttcaacgacgagtaatttggaacggagggagtat 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 69 tctagatacatccatttctgcgacgagtaatttagaacggagggagta 116
||||||||||||||| |||||| ||||||| ||||||||||||||
Sbjct: 49 tctagatacatccatacgtgcgacaagtaattcggaacggagggagta 2
>45292_miR1439:micropc
Length = 112
Score = 127 bits (64), Expect = 2e-30
Identities = 90/96 (93%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 24 cgaattatttgtcacaggtatggatgtatctagatgtattttaa-ttct-agatacatcc 81
||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 16 cgaattacttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatcc 75
Query: 82 atttctgcgacgagtaatttagaacggagggagtat 117
|||||||||||||||||||| |||||||||||||||
Sbjct: 76 atttctgcgacgagtaatttggaacggagggagtat 111
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 69 tctagatacatccatttctgcgacgagtaatt 100
||||||||||||||| ||||||| |||||||
Sbjct: 49 tctagatacatccatacctgcgacaagtaatt 18
>45250_miR1136:micropc
Length = 63
Score = 125 bits (63), Expect = 8e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 32 ttgtcacaggtatggatgtatctagatgtattttaattctagatacatccatttctgcga 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgtcacaggtatggatgtatctagatgtattttaattctagatacatccatttctgcga 60
Query: 92 cga 94
|||
Sbjct: 61 cga 63
>46322_miR1135:micropc
Length = 93
Score = 105 bits (53), Expect = 8e-24
Identities = 77/85 (90%)
Strand = Plus / Minus
Query: 25 gaattatttgtcacaggtatggatgtatctagatgtattttaattctagatacatccatt 84
|||||| ||||| || |||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 85 gaattacttgtcgcacgtatggatgtttctagatgtattttagttctagatacatccatt 26
Query: 85 tctgcgacgagtaatttagaacgga 109
| |||||||||||||| |||||||
Sbjct: 25 ttagcgacgagtaatttggaacgga 1
>46513_miR1136:micropc
Length = 63
Score = 101 bits (51), Expect = 1e-22
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 32 ttgtcacaggtatggatgtatctagatgtattttaattctagatacatccatttctgcga 91
||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ttgtcgcaggtatggatgcatctagatgtattttagttctagatacatccatttctgcga 60
Query: 92 cga 94
|||
Sbjct: 61 cga 63
>45512_miR1136:micropc
Length = 63
Score = 101 bits (51), Expect = 1e-22
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 32 ttgtcacaggtatggatgtatctagatgtattttaattctagatacatccatttctgcga 91
||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ttgtcgcaggtatagatgtatctagatgtattttagttctagatacatccatttctgcga 60
Query: 92 cga 94
|||
Sbjct: 61 cga 63
>45051_miR1135:micropc
Length = 93
Score = 101 bits (51), Expect = 1e-22
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 43 atggatgtatctagatgtattttaattctagatacatccatttctgcgacgagtaattt 101
|||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 67 atggatgtatctagatgtattttagttctagatacatccatttctgagacgagtaattt 9
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 69 tctagatacatccatttctgcgacgagtaatttagaacgga 109
||||||||||||||||| |||||||||||||| |||||||
Sbjct: 53 tctagatacatccatttttgcgacgagtaattcggaacgga 93
>45304_miR1128:micropc
Length = 108
Score = 93.7 bits (47), Expect = 3e-20
Identities = 89/103 (86%)
Strand = Plus / Minus
Query: 14 ccctccgtttcgaattatttgtcacaggtatggatgtatctagatgtattttaattctag 73
||||||||| |||||| ||||| || ||| |||||||||||||||||||| ||||||
Sbjct: 104 ccctccgttcggaattacttgtcgtagaaatgaatgtatctagatgtattttagttctag 45
Query: 74 atacatccatttctgcgacgagtaatttagaacggagggagta 116
|||||||||||| | ||| |||||||| ||||||||||||||
Sbjct: 44 atacatccattttcgagacaagtaatttcgaacggagggagta 2
Score = 56.0 bits (28), Expect = 6e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 69 tctagatacatccatttctgcgacgagtaatttagaacggagggagta 116
||||||||||| ||||||| |||| ||||||| ||||||||||||||
Sbjct: 61 tctagatacattcatttctacgacaagtaattccgaacggagggagta 108
>45244_miR1136:micropc
Length = 63
Score = 89.7 bits (45), Expect = 5e-19
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 32 ttgtcacaggtatggatgtatctagatgtattttaattctagatacatccatttctg 88
||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||
Sbjct: 1 ttgtcacaggtatggatatatctagatgtattttagttctggatacatccatttctg 57
>46810_miR1136:micropc
Length = 65
Score = 81.8 bits (41), Expect = 1e-16
Identities = 61/65 (93%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 32 ttgtcacaggtatggatgtatctagatgtatttta-attc-tagatacatccatttctgc 89
||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatccatttctgc 60
Query: 90 gacga 94
|||||
Sbjct: 61 gacga 65
>46139_miR1136:micropc
Length = 65
Score = 81.8 bits (41), Expect = 1e-16
Identities = 61/65 (93%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 32 ttgtcacaggtatggatgtatctagatgtatttta-attc-tagatacatccatttctgc 89
||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatccatttctgc 60
Query: 90 gacga 94
|||||
Sbjct: 61 gacga 65
>45649_miR1135:micropc
Length = 95
Score = 81.8 bits (41), Expect = 1e-16
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 26 aattatttgtcacaggtatggatgtatctagatgtattttaattctagatacatccattt 85
||||| ||||| ||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 86 aattacttgtcgcagaaatggatgtatctagatgtattttagttctagatacatccattt 27
Query: 86 c 86
|
Sbjct: 26 c 26
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 69 tctagatacatccatttctgcgacgagtaatttagaacgga 109
|||||||||||||||||||||||| |||||||| |||||||
Sbjct: 55 tctagatacatccatttctgcgacaagtaatttcgaacgga 95
>45578_miR1136:micropc
Length = 65
Score = 81.8 bits (41), Expect = 1e-16
Identities = 61/65 (93%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 32 ttgtcacaggtatggatgtatctagatgtatttta-attc-tagatacatccatttctgc 89
||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatccatttctgc 60
Query: 90 gacga 94
|||||
Sbjct: 61 gacga 65
>45217_miR1136:micropc
Length = 65
Score = 81.8 bits (41), Expect = 1e-16
Identities = 61/65 (93%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 32 ttgtcacaggtatggatgtatctagatgtatttta-attc-tagatacatccatttctgc 89
||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatccatttctgc 60
Query: 90 gacga 94
|||||
Sbjct: 61 gacga 65
>45029_miR1136:micropc
Length = 65
Score = 81.8 bits (41), Expect = 1e-16
Identities = 61/65 (93%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 32 ttgtcacaggtatggatgtatctagatgtatttta-attc-tagatacatccatttctgc 89
||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatccatttctgc 60
Query: 90 gacga 94
|||||
Sbjct: 61 gacga 65
>46065_miR1135:micropc
Length = 89
Score = 77.8 bits (39), Expect = 2e-15
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 43 atggatgtatctagatgtattttaattctagatacatccattt 85
||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 65 atggatgtatctagacgtattttaattctagatacatccattt 23
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 69 tctagatacatccatttctgcgacgagtaatt 100
||||||||||||||||| |||||| |||||||
Sbjct: 51 tctagatacatccatttatgcgacaagtaatt 82
>46822_miR1135:micropc
Length = 93
Score = 71.9 bits (36), Expect = 1e-13
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 25 gaattatttgtcacaggtatggatgtatctagatgtattttaattctagatacatccatt 84
|||||| ||||| ||| || |||||||||||| |||||||||||||||||||||||||
Sbjct: 85 gaattacttgtcgcagaaatagatgtatctagacatattttaattctagatacatccatt 26
Query: 85 tctgcgacgagtaatt 100
|| | ||| |||||||
Sbjct: 25 tccgagacaagtaatt 10
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 69 tctagatacatccatttctgcgacgagtaatttagaacgga 109
|||||||||||| ||||||||||| ||||||| |||||||
Sbjct: 53 tctagatacatctatttctgcgacaagtaattccgaacgga 93
>45199_miR1135:micropc
Length = 93
Score = 71.9 bits (36), Expect = 1e-13
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 25 gaattatttgtcacaggtatggatgtatctagatgtattttaattctagatacatccatt 84
|||||| ||||| ||| || |||||||||||| |||||||||||||||||||||||||
Sbjct: 85 gaattacttgtcgcagaaatagatgtatctagacatattttaattctagatacatccatt 26
Query: 85 tctgcgacgagtaatt 100
|| | ||| |||||||
Sbjct: 25 tccgagacaagtaatt 10
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 69 tctagatacatccatttctgcgacgagtaatttagaacgga 109
|||||||||||| ||||||||||| ||||||| |||||||
Sbjct: 53 tctagatacatctatttctgcgacaagtaattccgaacgga 93
>45643_miR1136:micropc
Length = 63
Score = 65.9 bits (33), Expect = 7e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 43 atggatgtatctagatgtattttaattctagatacat 79
|||||||||||||||||||||||| ||||||||||||
Sbjct: 12 atggatgtatctagatgtattttagttctagatacat 48
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 69 tctagatacatccatttctgcgac 92
||||||||||||||||||||||||
Sbjct: 26 tctagatacatccatttctgcgac 3
>46044_miR1128:micropc
Length = 128
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 45 ggatgtatctagatgtattttaattctagatacatc 80
|||||||||||||||||||||| |||||||||||||
Sbjct: 83 ggatgtatctagatgtattttagttctagatacatc 48
>45461_miR1128:micropc
Length = 128
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 45 ggatgtatctagatgtattttaattctagatacatc 80
|||||||||||||||||||||| |||||||||||||
Sbjct: 83 ggatgtatctagatgtattttagttctagatacatc 48
>44841_miR1128:micropc
Length = 128
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 45 ggatgtatctagatgtattttaattctagatacatc 80
|||||||||||||||||||||| |||||||||||||
Sbjct: 83 ggatgtatctagatgtattttagttctagatacatc 48
>46650_miR1128:micropc
Length = 114
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttaattctagatacatccattt 85
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>46443_miR1128:micropc
Length = 114
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttaattctagatacatccattt 85
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>46231_miR1128:micropc
Length = 114
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttaattctagatacatccattt 85
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>46218_miR1128:micropc
Length = 114
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttaattctagatacatccattt 85
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>46180_miR1128:micropc
Length = 114
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttaattctagatacatccattt 85
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>46136_miR1128:micropc
Length = 114
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttaattctagatacatccattt 85
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45836_miR1128:micropc
Length = 114
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttaattctagatacatccattt 85
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45824_miR1128:micropc
Length = 114
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttaattctagatacatccattt 85
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45818_miR1128:micropc
Length = 114
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttaattctagatacatccattt 85
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45729_miR1128:micropc
Length = 114
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttaattctagatacatccattt 85
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45575_miR1128:micropc
Length = 114
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttaattctagatacatccattt 85
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45466_miR1128:micropc
Length = 114
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttaattctagatacatccattt 85
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45233_miR1128:micropc
Length = 133
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 45 ggatgtatctagatgtattttaattctagatacatc 80
|||||||||||||||||||||| ||||| |||||||
Sbjct: 49 ggatgtatctagatgtattttagttctaaatacatc 84
>45150_miR1128:micropc
Length = 114
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttaattctagatacatccattt 85
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45094_miR1128:micropc
Length = 114
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttaattctagatacatccattt 85
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45155_miR1135:micropc
Length = 93
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 47 atgtatctagatgtattttaattctagatacatccattt 85
||||||||||| | ||||||||||||||||||||||||
Sbjct: 63 atgtatctagacgccttttaattctagatacatccattt 25
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 69 tctagatacatccatttctgcgacgagtaatttagaacgga 109
||||||||||| ||||| |||||| ||||||| |||||||
Sbjct: 53 tctagatacattcatttttgcgacaagtaattccgaacgga 93
>46174_miR1135:micropc
Length = 93
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 50 tatctagatgtattttaattctagatacatccatttc 86
||||||||||||||||| ||||| |||| ||||||||
Sbjct: 60 tatctagatgtattttagttctaaatacgtccatttc 24
>45621_miR1127:micropc
Length = 110
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 47 atgtatctagatgtattttaattctagatacatccattt 85
||||||||| ||| |||||| || |||||||||||||||
Sbjct: 35 atgtatctaaatgcattttagttgtagatacatccattt 73
>45241_miR1122:micropc
Length = 55
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 44 tggatgtatctagatgtattttaattctagatac 77
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Sbjct: 9 tggatgtatctggatgtattttagttatagatac 42
