miRNEST 2.0, an integrative microRNA resource :: BLAST
>45387_miR1439:micropc
Length = 109
Score = 155 bits (78), Expect = 9e-39
Identities = 103/110 (93%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 9 gtactcccaacgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagt 68
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtactccctccgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagt 60
Query: 69 tctagatacatccatttcagcgacagagtaatttggaacggaggtagtat 118
| |||| |||||||||||| |||| ||||||||||||||||||| |||||
Sbjct: 61 tttagacacatccatttcaacgac-gagtaatttggaacggagggagtat 109
>45862_miR1135:micropc
Length = 93
Score = 151 bits (76), Expect = 1e-37
Identities = 89/92 (96%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 19 cgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagttctagataca 78
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 91 cgttccgaattacttgtcgcacgtatggatgtatctagatgtattttaattctagataca 32
Query: 79 tccatttcagcgacagagtaatttggaacgga 110
||||||| |||||| |||||||||||||||||
Sbjct: 31 tccattttagcgac-gagtaatttggaacgga 1
>45703_miR1135:micropc
Length = 93
Score = 151 bits (76), Expect = 1e-37
Identities = 89/92 (96%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 19 cgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagttctagataca 78
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 91 cgttccgaattacttgtcgcacgtatggatgtatctagatgtattttaattctagataca 32
Query: 79 tccatttcagcgacagagtaatttggaacgga 110
||||||| |||||| |||||||||||||||||
Sbjct: 31 tccattttagcgac-gagtaatttggaacgga 1
>45493_miR1135:micropc
Length = 93
Score = 151 bits (76), Expect = 1e-37
Identities = 89/92 (96%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 19 cgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagttctagataca 78
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 91 cgttccgaattacttgtcgcacgtatggatgtatctagatgtattttaattctagataca 32
Query: 79 tccatttcagcgacagagtaatttggaacgga 110
||||||| |||||| |||||||||||||||||
Sbjct: 31 tccattttagcgac-gagtaatttggaacgga 1
>46322_miR1135:micropc
Length = 93
Score = 143 bits (72), Expect = 4e-35
Identities = 88/92 (95%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 19 cgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagttctagataca 78
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 91 cgttctgaattacttgtcgcacgtatggatgtttctagatgtattttagttctagataca 32
Query: 79 tccatttcagcgacagagtaatttggaacgga 110
||||||| |||||| |||||||||||||||||
Sbjct: 31 tccattttagcgac-gagtaatttggaacgga 1
>45292_miR1439:micropc
Length = 112
Score = 127 bits (64), Expect = 2e-30
Identities = 94/100 (94%), Gaps = 3/100 (3%)
Strand = Plus / Plus
Query: 21 ttccgaattacttgtcgcacgtatggatgtatctagatgtatttta-gttc-tagataca 78
||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||
Sbjct: 13 ttccgaattacttgtcgcaggtatggatgtatctagatgtattttaggttcttagataca 72
Query: 79 tccatttcagcgacagagtaatttggaacggaggtagtat 118
|||||||| ||||| ||||||||||||||||||| |||||
Sbjct: 73 tccatttctgcgac-gagtaatttggaacggagggagtat 111
>45051_miR1135:micropc
Length = 93
Score = 111 bits (56), Expect = 1e-25
Identities = 84/92 (91%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 19 cgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagttctagataca 78
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 91 cgttccgaattactcgtcgcaaaaatggatgtatctagatgtattttagttctagataca 32
Query: 79 tccatttcagcgacagagtaatttggaacgga 110
|||||||| | ||| |||||||||| ||||||
Sbjct: 31 tccatttctgagac-gagtaatttgaaacgga 1
Score = 44.1 bits (22), Expect = 2e-05
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 69 tctagatacatccatttcagcgacagagtaatttggaacgga 110
||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 53 tctagatacatccatttttgcgac-gagtaattcggaacgga 93
>46513_miR1136:micropc
Length = 63
Score = 97.6 bits (49), Expect = 2e-21
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 32 ttgtcgcacgtatggatgtatctagatgtattttagttctagatacatccatttcagcga 91
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ttgtcgcaggtatggatgcatctagatgtattttagttctagatacatccatttctgcga 60
Query: 92 c 92
|
Sbjct: 61 c 61
>45649_miR1135:micropc
Length = 95
Score = 97.6 bits (49), Expect = 2e-21
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 26 aattacttgtcgcacgtatggatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 aattacttgtcgcagaaatggatgtatctagatgtattttagttctagatacatccattt 27
Query: 86 c 86
|
Sbjct: 26 c 26
Score = 52.0 bits (26), Expect = 1e-07
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 69 tctagatacatccatttcagcgacagagtaatttggaacgga 110
|||||||||||||||||| |||||| |||||||| |||||||
Sbjct: 55 tctagatacatccatttctgcgaca-agtaatttcgaacgga 95
>45512_miR1136:micropc
Length = 63
Score = 97.6 bits (49), Expect = 2e-21
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 32 ttgtcgcacgtatggatgtatctagatgtattttagttctagatacatccatttcagcga 91
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ttgtcgcaggtatagatgtatctagatgtattttagttctagatacatccatttctgcga 60
Query: 92 c 92
|
Sbjct: 61 c 61
>45304_miR1128:micropc
Length = 108
Score = 95.6 bits (48), Expect = 7e-21
Identities = 94/108 (87%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 10 tactcccaacgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagtt 69
||||||| ||||| ||||||||||||| | ||| |||||||||||||||||||||||
Sbjct: 108 tactccctccgttcggaattacttgtcgtagaaatgaatgtatctagatgtattttagtt 49
Query: 70 ctagatacatccatttcagcgacagagtaatttggaacggaggtagta 117
|||||||||||||||| | |||| |||||||| ||||||||| ||||
Sbjct: 48 ctagatacatccattttcgagaca-agtaatttcgaacggagggagta 2
>45250_miR1136:micropc
Length = 63
Score = 89.7 bits (45), Expect = 5e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 32 ttgtcgcacgtatggatgtatctagatgtattttagttctagatacatccatttcagcga 91
||||| || |||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 1 ttgtcacaggtatggatgtatctagatgtattttaattctagatacatccatttctgcga 60
Query: 92 c 92
|
Sbjct: 61 c 61
>46065_miR1135:micropc
Length = 89
Score = 85.7 bits (43), Expect = 7e-18
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 19 cgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagttctagataca 78
||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||||
Sbjct: 89 cgttcggaattacttgtcgcataaatggatgtatctagacgtattttaattctagataca 30
Query: 79 tccattt 85
|||||||
Sbjct: 29 tccattt 23
>46810_miR1136:micropc
Length = 65
Score = 77.8 bits (39), Expect = 2e-15
Identities = 59/63 (93%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 32 ttgtcgcacgtatggatgtatctagatgtatttta-gttc-tagatacatccatttcagc 89
|||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| ||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatccatttctgc 60
Query: 90 gac 92
|||
Sbjct: 61 gac 63
>46139_miR1136:micropc
Length = 65
Score = 77.8 bits (39), Expect = 2e-15
Identities = 59/63 (93%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 32 ttgtcgcacgtatggatgtatctagatgtatttta-gttc-tagatacatccatttcagc 89
|||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| ||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatccatttctgc 60
Query: 90 gac 92
|||
Sbjct: 61 gac 63
>45578_miR1136:micropc
Length = 65
Score = 77.8 bits (39), Expect = 2e-15
Identities = 59/63 (93%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 32 ttgtcgcacgtatggatgtatctagatgtatttta-gttc-tagatacatccatttcagc 89
|||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| ||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatccatttctgc 60
Query: 90 gac 92
|||
Sbjct: 61 gac 63
>45244_miR1136:micropc
Length = 63
Score = 77.8 bits (39), Expect = 2e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 32 ttgtcgcacgtatggatgtatctagatgtattttagttctagatacatccatttc 86
||||| || |||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 1 ttgtcacaggtatggatatatctagatgtattttagttctggatacatccatttc 55
>45217_miR1136:micropc
Length = 65
Score = 77.8 bits (39), Expect = 2e-15
Identities = 59/63 (93%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 32 ttgtcgcacgtatggatgtatctagatgtatttta-gttc-tagatacatccatttcagc 89
|||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| ||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatccatttctgc 60
Query: 90 gac 92
|||
Sbjct: 61 gac 63
>45029_miR1136:micropc
Length = 65
Score = 77.8 bits (39), Expect = 2e-15
Identities = 59/63 (93%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 32 ttgtcgcacgtatggatgtatctagatgtatttta-gttc-tagatacatccatttcagc 89
|||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| ||
Sbjct: 1 ttgtcgcaggtatggatgtatctagatgtattttaggttcttagatacatccatttctgc 60
Query: 90 gac 92
|||
Sbjct: 61 gac 63
>45643_miR1136:micropc
Length = 63
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 43 atggatgtatctagatgtattttagttctagatacat 79
|||||||||||||||||||||||||||||||||||||
Sbjct: 12 atggatgtatctagatgtattttagttctagatacat 48
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 69 tctagatacatccatttcagcgaca 93
|||||||||||||||||| ||||||
Sbjct: 26 tctagatacatccatttctgcgaca 2
>46822_miR1135:micropc
Length = 93
Score = 71.9 bits (36), Expect = 1e-13
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 19 cgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagttctagataca 78
||||| ||||||||||||||| || |||||||||||| ||||||| |||||||||||
Sbjct: 91 cgttcggaattacttgtcgcagaaatagatgtatctagacatattttaattctagataca 32
Query: 79 tccatttc 86
||||||||
Sbjct: 31 tccatttc 24
>46044_miR1128:micropc
Length = 128
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 45 ggatgtatctagatgtattttagttctagatacatc 80
||||||||||||||||||||||||||||||||||||
Sbjct: 83 ggatgtatctagatgtattttagttctagatacatc 48
>45461_miR1128:micropc
Length = 128
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 45 ggatgtatctagatgtattttagttctagatacatc 80
||||||||||||||||||||||||||||||||||||
Sbjct: 83 ggatgtatctagatgtattttagttctagatacatc 48
>45199_miR1135:micropc
Length = 93
Score = 71.9 bits (36), Expect = 1e-13
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 19 cgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagttctagataca 78
||||| ||||||||||||||| || |||||||||||| ||||||| |||||||||||
Sbjct: 91 cgttcggaattacttgtcgcagaaatagatgtatctagacatattttaattctagataca 32
Query: 79 tccatttc 86
||||||||
Sbjct: 31 tccatttc 24
>44841_miR1128:micropc
Length = 128
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 45 ggatgtatctagatgtattttagttctagatacatc 80
||||||||||||||||||||||||||||||||||||
Sbjct: 83 ggatgtatctagatgtattttagttctagatacatc 48
>46650_miR1128:micropc
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>46443_miR1128:micropc
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>46231_miR1128:micropc
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>46218_miR1128:micropc
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>46180_miR1128:micropc
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>46136_miR1128:micropc
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45836_miR1128:micropc
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45824_miR1128:micropc
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45818_miR1128:micropc
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45729_miR1128:micropc
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45575_miR1128:micropc
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45466_miR1128:micropc
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45233_miR1128:micropc
Length = 133
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 45 ggatgtatctagatgtattttagttctagatacatc 80
|||||||||||||||||||||||||||| |||||||
Sbjct: 49 ggatgtatctagatgtattttagttctaaatacatc 84
>45150_miR1128:micropc
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45094_miR1128:micropc
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 46 gatgtatctagatgtattttagttctagatacatccattt 85
|||||||||||||||||||| ||||||||||||| |||||
Sbjct: 81 gatgtatctagatgtattttggttctagatacattcattt 42
>45155_miR1135:micropc
Length = 93
Score = 61.9 bits (31), Expect = 1e-10
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 19 cgttccgaattacttgtcgcacgtatggatgtatctagatgtattttagttctagataca 78
||||| ||||||||||||||| ||| ||||||||||| | ||||| |||||||||||
Sbjct: 91 cgttcggaattacttgtcgcaaaaatgaatgtatctagacgccttttaattctagataca 32
Query: 79 tccattt 85
|||||||
Sbjct: 31 tccattt 25
>46174_miR1135:micropc
Length = 93
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 50 tatctagatgtattttagttctagatacatccatttc 86
||||||||||||||||||||||| |||| ||||||||
Sbjct: 60 tatctagatgtattttagttctaaatacgtccatttc 24
>45621_miR1127:micropc
Length = 110
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 47 atgtatctagatgtattttagttctagatacatccattt 85
||||||||| ||| ||||||||| |||||||||||||||
Sbjct: 35 atgtatctaaatgcattttagttgtagatacatccattt 73
>45241_miR1122:micropc
Length = 55
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 44 tggatgtatctagatgtattttagttctagatac 77
||||||||||| |||||||||||||| |||||||
Sbjct: 9 tggatgtatctggatgtattttagttatagatac 42
>45634_miR1133:micropc
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/41 (90%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 46 gatgtatctagatgtattttagttcta-gatacatccattt 85
|||||||||| || |||||||||| || |||||||||||||
Sbjct: 38 gatgtatctanatttattttagttttacgatacatccattt 78
>45127_miR1133:micropc
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/41 (90%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 46 gatgtatctagatgtattttagttcta-gatacatccattt 85
|||||||||| || |||||||||| || |||||||||||||
Sbjct: 38 gatgtatctanatttattttagttttacgatacatccattt 78
>45057_miR1133:micropc
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/41 (90%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 46 gatgtatctagatgtattttagttcta-gatacatccattt 85
|||||||||| || |||||||||| || |||||||||||||
Sbjct: 38 gatgtatctanatttattttagttttacgatacatccattt 78
