miRNEST 2.0, an integrative microRNA resource :: BLAST
>46187_miR1132:micropc
Length = 82
Score = 113 bits (57), Expect = 2e-26
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 11 ccctccgtcncataangtaagacgttttttcacac-tacactagtgtcaaaaaacgtnnt 69
||||||||| ||||| ||||||||||||||||||| ||||||||||||||| ||||| |
Sbjct: 3 ccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaacgtctt 62
Query: 70 acattatggaacggagggag 89
||||||||||||||||||||
Sbjct: 63 acattatggaacggagggag 82
>46658_miR1436:micropc
Length = 79
Score = 91.7 bits (46), Expect = 9e-20
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 11 ccctccgtcncataangtaagacgttttttcacactacactagtgtcaaaaaacgtnnta 70
||||||||| | ||| |||||||||||||| |||||||| ||| |||||||||||| ||
Sbjct: 2 ccctccgtcccgtaatgtaagacgttttttgacactacaatagagtcaaaaaacgtctta 61
Query: 71 cattatggaacggaggga 88
|||||||| |||||||||
Sbjct: 62 cattatgggacggaggga 79
Score = 75.8 bits (38), Expect = 5e-15
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 11 ccctccgtcncataangtaagacgttttttcacactacactagtgtcaaaaaacgtnnta 70
||||||||| ||||| |||||||||||||| || ||| |||||||||||||||| ||
Sbjct: 78 ccctccgtcccataatgtaagacgttttttgactctattgtagtgtcaaaaaacgtctta 19
Query: 71 cattatggaacggaggga 88
||||| || |||||||||
Sbjct: 18 cattacgggacggaggga 1
>46077_miR1130:micropc
Length = 75
Score = 85.7 bits (43), Expect = 6e-18
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 12 cctccgtcncataangtaagacgttttttcacactacactagtgtcaaaaaacgtnntac 71
|||||||| | ||| |||||||||||||| |||||||| ||| |||||||||||| |||
Sbjct: 1 cctccgtcccgtaatgtaagacgttttttgacactacaatagagtcaaaaaacgtcttac 60
Query: 72 attatggaacggagg 86
||||||| |||||||
Sbjct: 61 attatgggacggagg 75
Score = 69.9 bits (35), Expect = 3e-13
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 12 cctccgtcncataangtaagacgttttttcacactacactagtgtcaaaaaacgtnntac 71
|||||||| ||||| |||||||||||||| || ||| |||||||||||||||| |||
Sbjct: 75 cctccgtcccataatgtaagacgttttttgactctattgtagtgtcaaaaaacgtcttac 16
Query: 72 attatggaacggagg 86
|||| || |||||||
Sbjct: 15 attacgggacggagg 1
>46150_miR1130:micropc
Length = 75
Score = 69.9 bits (35), Expect = 3e-13
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 12 cctccgtcncataangtaagacgttttttcacactacactagtgtcaaaaaacgtnntac 71
|||||||| ||||| ||||||| |||||| ||| |||||||| |||||||||||| |||
Sbjct: 1 cctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtcttac 60
Query: 72 attatgg 78
||||||
Sbjct: 61 gttatgg 67
Score = 54.0 bits (27), Expect = 2e-08
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 12 cctccgtcncataangtaagacgttttttcacactacactagtgtcaaaaaacgtnntac 71
|||| ||| ||||| |||||||||||||| || ||| || |||||||||| || |||
Sbjct: 75 cctctgtcccataacgtaagacgttttttgactctagtgtaatgtcaaaaaatgtcttac 16
Query: 72 attatggaacggagg 86
||||||| |||||||
Sbjct: 15 attatgggacggagg 1
>46428_miR1436:micropc
Length = 69
Score = 61.9 bits (31), Expect = 8e-11
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 54 tgtcaaaaaacgtnntacattatggaacggagggagt 90
||||||||||||| ||||||||||||||||||||||
Sbjct: 37 tgtcaaaaaacgtcttacattatggaacggagggagt 1
Score = 48.1 bits (24), Expect = 1e-06
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 57 caaaaaacgtnntacattatggaacggagggagt 90
|||||||||| |||||||||| |||||||||||
Sbjct: 36 caaaaaacgtcttacattatgggacggagggagt 69
Score = 48.1 bits (24), Expect = 1e-06
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 11 ccctccgtcncataangtaagacgtttttt 40
||||||||| ||||| ||||||||||||||
Sbjct: 66 ccctccgtcccataatgtaagacgtttttt 37
Score = 40.1 bits (20), Expect = 3e-04
Identities = 27/30 (90%)
Strand = Plus / Plus
Query: 11 ccctccgtcncataangtaagacgtttttt 40
|||||||| ||||| ||||||||||||||
Sbjct: 4 ccctccgttccataatgtaagacgtttttt 33
>46264_miR1436:micropc
Length = 69
Score = 61.9 bits (31), Expect = 8e-11
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 54 tgtcaaaaaacgtnntacattatggaacggagggagt 90
||||||||||||| ||||||||||||||||||||||
Sbjct: 37 tgtcaaaaaacgtcttacattatggaacggagggagt 1
Score = 48.1 bits (24), Expect = 1e-06
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 57 caaaaaacgtnntacattatggaacggagggagt 90
|||||||||| |||||||||| |||||||||||
Sbjct: 36 caaaaaacgtcttacattatgggacggagggagt 69
Score = 48.1 bits (24), Expect = 1e-06
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 11 ccctccgtcncataangtaagacgtttttt 40
||||||||| ||||| ||||||||||||||
Sbjct: 66 ccctccgtcccataatgtaagacgtttttt 37
Score = 40.1 bits (20), Expect = 3e-04
Identities = 27/30 (90%)
Strand = Plus / Plus
Query: 11 ccctccgtcncataangtaagacgtttttt 40
|||||||| ||||| ||||||||||||||
Sbjct: 4 ccctccgttccataatgtaagacgtttttt 33
>45393_miR1436:micropc
Length = 69
Score = 61.9 bits (31), Expect = 8e-11
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 54 tgtcaaaaaacgtnntacattatggaacggagggagt 90
||||||||||||| ||||||||||||||||||||||
Sbjct: 37 tgtcaaaaaacgtcttacattatggaacggagggagt 1
Score = 48.1 bits (24), Expect = 1e-06
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 57 caaaaaacgtnntacattatggaacggagggagt 90
|||||||||| |||||||||| |||||||||||
Sbjct: 36 caaaaaacgtcttacattatgggacggagggagt 69
Score = 48.1 bits (24), Expect = 1e-06
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 11 ccctccgtcncataangtaagacgtttttt 40
||||||||| ||||| ||||||||||||||
Sbjct: 66 ccctccgtcccataatgtaagacgtttttt 37
Score = 40.1 bits (20), Expect = 3e-04
Identities = 27/30 (90%)
Strand = Plus / Plus
Query: 11 ccctccgtcncataangtaagacgtttttt 40
|||||||| ||||| ||||||||||||||
Sbjct: 4 ccctccgttccataatgtaagacgtttttt 33
>45005_miR1436:micropc
Length = 69
Score = 61.9 bits (31), Expect = 8e-11
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 54 tgtcaaaaaacgtnntacattatggaacggagggagt 90
||||||||||||| ||||||||||||||||||||||
Sbjct: 37 tgtcaaaaaacgtcttacattatggaacggagggagt 1
Score = 48.1 bits (24), Expect = 1e-06
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 57 caaaaaacgtnntacattatggaacggagggagt 90
|||||||||| |||||||||| |||||||||||
Sbjct: 36 caaaaaacgtcttacattatgggacggagggagt 69
Score = 48.1 bits (24), Expect = 1e-06
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 11 ccctccgtcncataangtaagacgtttttt 40
||||||||| ||||| ||||||||||||||
Sbjct: 66 ccctccgtcccataatgtaagacgtttttt 37
Score = 40.1 bits (20), Expect = 3e-04
Identities = 27/30 (90%)
Strand = Plus / Plus
Query: 11 ccctccgtcncataangtaagacgtttttt 40
|||||||| ||||| ||||||||||||||
Sbjct: 4 ccctccgttccataatgtaagacgtttttt 33
>44928_miR1436:micropc
Length = 69
Score = 61.9 bits (31), Expect = 8e-11
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 54 tgtcaaaaaacgtnntacattatggaacggagggagt 90
||||||||||||| ||||||||||||||||||||||
Sbjct: 37 tgtcaaaaaacgtcttacattatggaacggagggagt 1
Score = 48.1 bits (24), Expect = 1e-06
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 57 caaaaaacgtnntacattatggaacggagggagt 90
|||||||||| |||||||||| |||||||||||
Sbjct: 36 caaaaaacgtcttacattatgggacggagggagt 69
Score = 48.1 bits (24), Expect = 1e-06
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 11 ccctccgtcncataangtaagacgtttttt 40
||||||||| ||||| ||||||||||||||
Sbjct: 66 ccctccgtcccataatgtaagacgtttttt 37
Score = 40.1 bits (20), Expect = 3e-04
Identities = 27/30 (90%)
Strand = Plus / Plus
Query: 11 ccctccgtcncataangtaagacgtttttt 40
|||||||| ||||| ||||||||||||||
Sbjct: 4 ccctccgttccataatgtaagacgtttttt 33
>45479_miR1436:micropc
Length = 83
Score = 56.0 bits (28), Expect = 5e-09
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 11 ccctccgtcncataangtaagacgttttttcacactacactagtgtcaaaaaacgtnnta 70
|||| |||| ||||| |||||| ||||||| ||||||||||| |||| |||| || ||
Sbjct: 80 cccttcgtcccataatgtaagatgttttttgacactacactacagtcagaaaatgtctta 21
Query: 71 cattatggaacggagggagt 90
||||| || || ||||||||
Sbjct: 20 cattacgggacagagggagt 1
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 51 tagtgtcaaaaaacgtnntacattatggaacggagggagt 90
|||||||||||||| | |||||||||| ||| |||||||
Sbjct: 44 tagtgtcaaaaaacatcttacattatgggacgaagggagt 83
>46467_miR1130:micropc
Length = 56
Score = 46.1 bits (23), Expect = 5e-06
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 cctccgtcncataangtaagacgtttttt 40
|||||||| ||||| ||||||||||||||
Sbjct: 1 cctccgtctcataatgtaagacgtttttt 29
>45448_miR1436:micropc
Length = 64
Score = 46.1 bits (23), Expect = 5e-06
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 cctccgtcncataangtaagacgtttttt 40
|||||||| ||||| ||||||||||||||
Sbjct: 5 cctccgtctcataatgtaagacgtttttt 33
>45044_miR1130:micropc
Length = 56
Score = 46.1 bits (23), Expect = 5e-06
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 cctccgtcncataangtaagacgtttttt 40
|||||||| ||||| ||||||||||||||
Sbjct: 1 cctccgtctcataatgtaagacgtttttt 29
>45676_miR1436:micropc
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 32 acgttttttcacactacactagtgt 56
||||||||| |||||||||||||||
Sbjct: 60 acgttttttgacactacactagtgt 36
>46433_miR1439:micropc
Length = 153
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 69 tacattatggaacggagggagtat 92
|||||| |||||||||||||||||
Sbjct: 130 tacattttggaacggagggagtat 153
