miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45994_miR1436:micropc
          Length = 162

 Score =  139 bits (70), Expect = 8e-34
 Identities = 142/162 (87%), Gaps = 3/162 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   acttcctccgttcctaaatataagtctttttaaagatttcactacag-actacatacgga 65
           |||||||||||| ||||||||||||||||| |  |||||| ||| || |||||||||  |
Sbjct: 1   acttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaa 60

                                                                       
Query: 66  gcaaaatgagtgaatctacgctctaaaatatgtctatatacatccgtatgtagt-ttgta 124
           ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  | ||
Sbjct: 61  gcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctcta 120

                                                     
Query: 125 ttgaaatc-ctagaaagacttatatttaggaacggagggagt 165
            || |||| ||| |||||||||||||  ||||||||||||||
Sbjct: 121 gtggaatctctaaaaagacttatattatggaacggagggagt 162



 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 50/56 (89%), Gaps = 1/56 (1%)
 Strand = Plus / Minus

                                                                   
Query: 11  cctccgttcctaaatataagtctttttaaagatttcactaca-gactacatacgga 65
           ||||||||||  |||||||||||||||| ||||| ||||| | |||||||||||||
Sbjct: 158 cctccgttccataatataagtctttttagagattccactagaggactacatacgga 103



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 137 aaagacttatatttaggaacggagg 161
           |||||||||||||||| ||||||||
Sbjct: 29  aaagacttatatttagaaacggagg 5




>45049_miR1126:micropc
          Length = 86

 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                       
Query: 47  actacagactacatacggagcaaaatgagtgaatctacgctctaaaatatgtctatatac 106
           ||||| ||| ||||||||||||||| |||||| | ||| ||||| | |||||||||||||
Sbjct: 83  actacggacaacatacggagcaaaacgagtgattgtacactctacagtatgtctatatac 24

                        
Query: 107 atccgtatgtagt 119
           |||||||||||||
Sbjct: 23  atccgtatgtagt 11




>44799_miR1126:micropc
          Length = 86

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 53  gactacatacggagcaaaatgagtgaatctacgctctaaaatatgtctatatacatccgt 112
           |||||| ||||||||||||| | ||||||||| |||||||||   |||| |||||| |||
Sbjct: 10  gactacttacggagcaaaataaatgaatctacactctaaaatgcatctacatacattcgt 69

               
Query: 113 atgt 116
           ||||
Sbjct: 70  atgt 73