miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45676_miR1436:micropc
          Length = 85

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                   
Query: 11 ctccgtcccataatata-gaacgttttttgacactacacta 50
          ||||| ||||||||||| | |||||||||||||||||||||
Sbjct: 80 ctccgccccataatataagtacgttttttgacactacacta 40




>45479_miR1436:micropc
          Length = 83

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 50 aaaacatcttacattatgggatgaaggg 77
          ||||||||||||||||||||| ||||||
Sbjct: 53 aaaacatcttacattatgggacgaaggg 80



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                               
Query: 14 cgtcccataatatagaacgttttttgacactacacta 50
          ||||||||||| ||  | |||||||||||||||||||
Sbjct: 75 cgtcccataatgtaagatgttttttgacactacacta 39




>46658_miR1436:micropc
          Length = 79

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                               
Query: 11 ctccgtcccataatatagaacgttttttgacactaca 47
          ||||||||| |||| ||  ||||||||||||||||||
Sbjct: 4  ctccgtcccgtaatgtaagacgttttttgacactaca 40



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                         
Query: 11 ctccgtcccataatatagaacgttttttgac 41
          |||||||||||||| ||  ||||||||||||
Sbjct: 76 ctccgtcccataatgtaagacgttttttgac 46




>46077_miR1130:micropc
          Length = 75

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                               
Query: 11 ctccgtcccataatatagaacgttttttgacactaca 47
          ||||||||| |||| ||  ||||||||||||||||||
Sbjct: 2  ctccgtcccgtaatgtaagacgttttttgacactaca 38



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                         
Query: 11 ctccgtcccataatatagaacgttttttgac 41
          |||||||||||||| ||  ||||||||||||
Sbjct: 74 ctccgtcccataatgtaagacgttttttgac 44




>46150_miR1130:micropc
          Length = 75

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                  
Query: 11 ctccgtcccataatatagaacgttttttgacactacacta 50
          |||||||||||||| ||  || |||||||||| |||||||
Sbjct: 2  ctccgtcccataatgtaagacattttttgacattacacta 41