miRNEST 2.0, an integrative microRNA resource :: BLAST
>46836_miR1439:micropc
Length = 86
Score = 97.6 bits (49), Expect = 7e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 161 tactccctccgtcccataatataagagcgtttttgacattacattagtgtaaaaaacgct 220
||||||||||||| || |||||||||||||||||| || |||| |||||||||||| |||
Sbjct: 1 tactccctccgtctcaaaatataagagcgtttttggcactacactagtgtaaaaaatgct 60
Query: 221 cttatattatgggacgg 237
|||||||| ||||||||
Sbjct: 61 cttatattttgggacgg 77
Score = 65.9 bits (33), Expect = 2e-11
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 161 tactccctccgtcccataatataagagcgtttttgacattacattagtgtaaaaaacgct 220
|||||||||||||||| ||||||||||| ||||| ||| || ||||| |||||||||
Sbjct: 85 tactccctccgtcccaaaatataagagcattttttacactagtgtagtgccaaaaacgct 26
Query: 221 cttatattatgggacgg 237
|||||||| || |||||
Sbjct: 25 cttatattttgagacgg 9
>46560_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 2e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgttttt 194
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 58.0 bits (29), Expect = 6e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 209 gtaaaaaacgctcttatattatgggacgg 237
|||||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacgg 73
>46416_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 2e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgttttt 194
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 58.0 bits (29), Expect = 6e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 209 gtaaaaaacgctcttatattatgggacgg 237
|||||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacgg 73
>46351_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 2e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgttttt 194
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 58.0 bits (29), Expect = 6e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 209 gtaaaaaacgctcttatattatgggacgg 237
|||||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacgg 73
>46296_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 2e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgttttt 194
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 58.0 bits (29), Expect = 6e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 209 gtaaaaaacgctcttatattatgggacgg 237
|||||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacgg 73
>46229_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 2e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgttttt 194
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 58.0 bits (29), Expect = 6e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 209 gtaaaaaacgctcttatattatgggacgg 237
|||||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacgg 73
>46082_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 2e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgttttt 194
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 58.0 bits (29), Expect = 6e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 209 gtaaaaaacgctcttatattatgggacgg 237
|||||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacgg 73
>45853_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 2e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgttttt 194
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 58.0 bits (29), Expect = 6e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 209 gtaaaaaacgctcttatattatgggacgg 237
|||||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacgg 73
>45812_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 2e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgttttt 194
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 58.0 bits (29), Expect = 6e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 209 gtaaaaaacgctcttatattatgggacgg 237
|||||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacgg 73
>45616_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 2e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgttttt 194
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 58.0 bits (29), Expect = 6e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 209 gtaaaaaacgctcttatattatgggacgg 237
|||||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacgg 73
>45608_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 2e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgttttt 194
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 58.0 bits (29), Expect = 6e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 209 gtaaaaaacgctcttatattatgggacgg 237
|||||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacgg 73
>45459_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 2e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgttttt 194
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 58.0 bits (29), Expect = 6e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 209 gtaaaaaacgctcttatattatgggacgg 237
|||||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacgg 73
>45450_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 2e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgttttt 194
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 58.0 bits (29), Expect = 6e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 209 gtaaaaaacgctcttatattatgggacgg 237
|||||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacgg 73
>45382_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 2e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgttttt 194
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 58.0 bits (29), Expect = 6e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 209 gtaaaaaacgctcttatattatgggacgg 237
|||||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacgg 73
>45149_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 2e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgttttt 194
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 58.0 bits (29), Expect = 6e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 209 gtaaaaaacgctcttatattatgggacgg 237
|||||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacgg 73
>44955_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 2e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgttttt 194
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 58.0 bits (29), Expect = 6e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 209 gtaaaaaacgctcttatattatgggacgg 237
|||||||||||||||||||||||||||||
Sbjct: 45 gtaaaaaacgctcttatattatgggacgg 73
>46744_miR1436:micropc
Length = 83
Score = 60.0 bits (30), Expect = 1e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgtttttg 195
||||||||||||||||||||||||||| ||||||
Sbjct: 83 actccctccgtcccataatataagagcatttttg 50
Score = 50.1 bits (25), Expect = 1e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 162 actccctccgtcccataatataagagcgttttt 194
||||||||||| ||||||||||||| |||||||
Sbjct: 1 actccctccgttccataatataagaacgttttt 33
Score = 44.1 bits (22), Expect = 8e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 212 aaaaacgctcttatattatgggacgg 237
||||| ||||||||||||||||||||
Sbjct: 51 aaaaatgctcttatattatgggacgg 76
>46194_miR1436:micropc
Length = 83
Score = 52.0 bits (26), Expect = 3e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgtttttg 195
|||||||||||| |||||||||| ||||||||||
Sbjct: 83 actccctccgtctcataatataaaagcgtttttg 50
>46683_miR1436:micropc
Length = 60
Score = 48.1 bits (24), Expect = 5e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataag 185
||||||||||||||||||||||||
Sbjct: 60 actccctccgtcccataatataag 37
>46658_miR1436:micropc
Length = 79
Score = 46.1 bits (23), Expect = 2e-05
Identities = 64/75 (85%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 164 tccctccgtcccataatataagagcgtttttgacattacattagtgt-aaaaaacgctct 222
|||||||||||| |||| ||||| ||||||||| |||| ||| || |||||||| |||
Sbjct: 1 tccctccgtcccgtaatgtaagacgttttttgacactacaatagagtcaaaaaacg-tct 59
Query: 223 tatattatgggacgg 237
|| ||||||||||||
Sbjct: 60 tacattatgggacgg 74
>46280_miR1436:micropc
Length = 97
Score = 46.1 bits (23), Expect = 2e-05
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcgtttttgacattacattagtgtaaaaaa 216
|||||||||||| |||||||||| | ||||||||| ||||| ||||| |||||
Sbjct: 97 actccctccgtctcataatataaaatactttttgacactacatcagtgttaaaaa 43
>46150_miR1130:micropc
Length = 75
Score = 46.1 bits (23), Expect = 2e-05
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 166 cctccgtcccataatataagagcgtttttgacattacattagtgtaaaaaa 216
||||||||||||||| ||||| |||||||||||||| ||| || |||||
Sbjct: 1 cctccgtcccataatgtaagacattttttgacattacactagagtcaaaaa 51
>45676_miR1436:micropc
Length = 85
Score = 44.1 bits (22), Expect = 8e-05
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 162 actccctccgtcccataatataagagcg-tttttgacattacattagtgt 210
|||||||||| ||||||||||||| || ||||||||| |||| ||||||
Sbjct: 85 actccctccgccccataatataagtacgttttttgacactacactagtgt 36
