miRNEST 2.0, an integrative microRNA resource :: BLAST
>46836_miR1439:micropc
Length = 86
Score = 56.0 bits (28), Expect = 5e-09
Identities = 69/83 (83%), Gaps = 6/83 (7%)
Strand = Plus / Plus
Query: 11 tactccctctgtcccataatataagaacgtttttggcactaca------tcaaaaacgtt 64
||||||||| ||| || ||||||||| |||||||||||||||| | ||||| | |
Sbjct: 1 tactccctccgtctcaaaatataagagcgtttttggcactacactagtgtaaaaaatgct 60
Query: 65 cttatattatgggacggagggag 87
|||||||| ||||||||||||||
Sbjct: 61 cttatattttgggacggagggag 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 55 caaaaacgttcttatattatgggacggagggag 87
|||||||| ||||||||| || |||||||||||
Sbjct: 35 caaaaacgctcttatattttgagacggagggag 3
>46744_miR1436:micropc
Length = 83
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
||||||||||||||||||||| ||||||||||
Sbjct: 33 aaaaacgttcttatattatggaacggagggag 2
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| || |||||||||||||||||||||
Sbjct: 1 actccctccgttccataatataagaacgttttt 33
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 55 caaaaacgttcttatattatgggacggagggag 87
|||||| | ||||||||||||||||||||||||
Sbjct: 50 caaaaatgctcttatattatgggacggagggag 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgtttttg 45
|||||||| |||||||||||||||| | ||||||
Sbjct: 83 actccctccgtcccataatataagagcatttttg 50
>46560_miR1436:micropc
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
||||||| ||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggag 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| |||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46416_miR1436:micropc
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
||||||| ||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggag 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| |||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46351_miR1436:micropc
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
||||||| ||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggag 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| |||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46296_miR1436:micropc
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
||||||| ||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggag 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| |||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46229_miR1436:micropc
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
||||||| ||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggag 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| |||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46082_miR1436:micropc
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
||||||| ||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggag 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| |||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45853_miR1436:micropc
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
||||||| ||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggag 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| |||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45812_miR1436:micropc
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
||||||| ||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggag 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| |||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45616_miR1436:micropc
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
||||||| ||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggag 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| |||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45608_miR1436:micropc
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
||||||| ||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggag 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| |||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45459_miR1436:micropc
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
||||||| ||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggag 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| |||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45450_miR1436:micropc
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
||||||| ||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggag 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| |||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45382_miR1436:micropc
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
||||||| ||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggag 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| |||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45149_miR1436:micropc
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
||||||| ||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggag 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| |||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>44955_miR1436:micropc
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
||||||| ||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggag 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| |||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45676_miR1436:micropc
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 56 aaaaacgttcttatattatgggacggagggag 87
|||||||| ||||||||||||| |||||||||
Sbjct: 53 aaaaacgtacttatattatggggcggagggag 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataagaacgttttt 44
|||||||| | ||||||||||||| ||||||||
Sbjct: 85 actccctccgccccataatataagtacgttttt 53
>46683_miR1436:micropc
Length = 60
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 cttatattatgggacggagggag 87
|||||||||||||||||||||||
Sbjct: 37 cttatattatgggacggagggag 59
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataag 35
|||||||| |||||||||||||||
Sbjct: 60 actccctccgtcccataatataag 37
>46261_miR1120:micropc
Length = 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 57 aaaacgttcttatattatgggacggag 83
||||| |||||||||||||||||||||
Sbjct: 50 aaaacattcttatattatgggacggag 76
>46194_miR1436:micropc
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 55 caaaaacgttcttatattatgggacggagggag 87
|||||||| | |||||||||| |||||||||||
Sbjct: 50 caaaaacgcttttatattatgagacggagggag 82
>46428_miR1436:micropc
Length = 69
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 tcttatattatgggacggagggag 87
||||| ||||||||||||||||||
Sbjct: 45 tcttacattatgggacggagggag 68
>46264_miR1436:micropc
Length = 69
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 tcttatattatgggacggagggag 87
||||| ||||||||||||||||||
Sbjct: 45 tcttacattatgggacggagggag 68
>46187_miR1132:micropc
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 64 tcttatattatgggacggagggag 87
||||| ||||||||||||||||||
Sbjct: 24 tcttacattatgggacggagggag 1
>45448_miR1436:micropc
Length = 64
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 12 actccctctgtcccataatataag 35
||||||||||||||||||| ||||
Sbjct: 64 actccctctgtcccataatgtaag 41
>45393_miR1436:micropc
Length = 69
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 tcttatattatgggacggagggag 87
||||| ||||||||||||||||||
Sbjct: 45 tcttacattatgggacggagggag 68
>45005_miR1436:micropc
Length = 69
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 tcttatattatgggacggagggag 87
||||| ||||||||||||||||||
Sbjct: 45 tcttacattatgggacggagggag 68
>44928_miR1436:micropc
Length = 69
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 tcttatattatgggacggagggag 87
||||| ||||||||||||||||||
Sbjct: 45 tcttacattatgggacggagggag 68
