miRNEST 2.0, an integrative microRNA resource :: BLAST
>46836_miR1439:micropc
Length = 86
Score = 89.7 bits (45), Expect = 3e-19
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccataatataagagcgtttttaacactattctagtgtcaagaacgct 70
|||||||||||||||| ||||||||||| ||||| |||||| | ||||| ||| ||||||
Sbjct: 85 tactccctccgtcccaaaatataagagcattttttacactagtgtagtgccaaaaacgct 26
Query: 71 cttatattacgggacggagggagta 95
|||||||| | |||||||||||||
Sbjct: 25 cttatattttgagacggagggagta 1
Score = 81.8 bits (41), Expect = 8e-17
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccataatataagagcgtttttaacactattctagtgtcaagaacgct 70
||||||||||||| || ||||||||||||||||| ||||| ||||||| || || |||
Sbjct: 1 tactccctccgtctcaaaatataagagcgtttttggcactacactagtgtaaaaaatgct 60
Query: 71 cttatattacgggacggagggagta 95
|||||||| |||||||||||||||
Sbjct: 61 cttatattttgggacggagggagta 85
>46560_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aacgctcttatattacgggacggagggagt 94
||||||||||||||| ||||||||||||||
Sbjct: 51 aacgctcttatattatgggacggagggagt 80
>46416_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aacgctcttatattacgggacggagggagt 94
||||||||||||||| ||||||||||||||
Sbjct: 51 aacgctcttatattatgggacggagggagt 80
>46351_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aacgctcttatattacgggacggagggagt 94
||||||||||||||| ||||||||||||||
Sbjct: 51 aacgctcttatattatgggacggagggagt 80
>46296_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aacgctcttatattacgggacggagggagt 94
||||||||||||||| ||||||||||||||
Sbjct: 51 aacgctcttatattatgggacggagggagt 80
>46229_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aacgctcttatattacgggacggagggagt 94
||||||||||||||| ||||||||||||||
Sbjct: 51 aacgctcttatattatgggacggagggagt 80
>46082_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aacgctcttatattacgggacggagggagt 94
||||||||||||||| ||||||||||||||
Sbjct: 51 aacgctcttatattatgggacggagggagt 80
>45853_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aacgctcttatattacgggacggagggagt 94
||||||||||||||| ||||||||||||||
Sbjct: 51 aacgctcttatattatgggacggagggagt 80
>45812_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aacgctcttatattacgggacggagggagt 94
||||||||||||||| ||||||||||||||
Sbjct: 51 aacgctcttatattatgggacggagggagt 80
>45616_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aacgctcttatattacgggacggagggagt 94
||||||||||||||| ||||||||||||||
Sbjct: 51 aacgctcttatattatgggacggagggagt 80
>45608_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aacgctcttatattacgggacggagggagt 94
||||||||||||||| ||||||||||||||
Sbjct: 51 aacgctcttatattatgggacggagggagt 80
>45459_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aacgctcttatattacgggacggagggagt 94
||||||||||||||| ||||||||||||||
Sbjct: 51 aacgctcttatattatgggacggagggagt 80
>45450_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aacgctcttatattacgggacggagggagt 94
||||||||||||||| ||||||||||||||
Sbjct: 51 aacgctcttatattatgggacggagggagt 80
>45382_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aacgctcttatattacgggacggagggagt 94
||||||||||||||| ||||||||||||||
Sbjct: 51 aacgctcttatattatgggacggagggagt 80
>45149_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aacgctcttatattacgggacggagggagt 94
||||||||||||||| ||||||||||||||
Sbjct: 51 aacgctcttatattatgggacggagggagt 80
>44955_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 aacgctcttatattacgggacggagggagt 94
||||||||||||||| ||||||||||||||
Sbjct: 51 aacgctcttatattatgggacggagggagt 80
>46658_miR1436:micropc
Length = 79
Score = 61.9 bits (31), Expect = 8e-11
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 14 tccctccgtcccataatataagagcgtttttaacactattctagtgtcaagaacgctctt 73
||||||||||||||||| ||||| ||||| || ||||| ||||||||| || ||||
Sbjct: 79 tccctccgtcccataatgtaagacgttttttgactctattgtagtgtcaaaaaacgtctt 20
Query: 74 atattacgggacggaggga 92
| |||||||||||||||||
Sbjct: 19 acattacgggacggaggga 1
>46744_miR1436:micropc
Length = 83
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
||||||||||||||||||||||||||| |||||
Sbjct: 83 actccctccgtcccataatataagagcattttt 51
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 actccctccgtcccataatataagagcgttttt 44
||||||||||| ||||||||||||| |||||||
Sbjct: 1 actccctccgttccataatataagaacgttttt 33
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 gctcttatattacgggacggagggagt 94
|||||||||||| ||||||||||||||
Sbjct: 57 gctcttatattatgggacggagggagt 83
>46077_miR1130:micropc
Length = 75
Score = 54.0 bits (27), Expect = 2e-08
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 16 cctccgtcccataatataagagcgtttttaacactattctagtgtcaagaacgctcttat 75
||||||||||||||| ||||| ||||| || ||||| ||||||||| || |||||
Sbjct: 75 cctccgtcccataatgtaagacgttttttgactctattgtagtgtcaaaaaacgtcttac 16
Query: 76 attacgggacggagg 90
|||||||||||||||
Sbjct: 15 attacgggacggagg 1
>46194_miR1436:micropc
Length = 83
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataagagcgttttt 44
|||||||||||| |||||||||| |||||||||
Sbjct: 83 actccctccgtctcataatataaaagcgttttt 51
Score = 46.1 bits (23), Expect = 4e-06
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 40 tttttaacactattctagtgtcaagaacgctcttatattacgggacggagggagt 94
||||| ||||||| |||| | ||| |||||| |||||||| | ||||||||||||
Sbjct: 29 tttttgacactatactaggggcaaaaacgcttttatattatgagacggagggagt 83
>46683_miR1436:micropc
Length = 60
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 actccctccgtcccataatataag 35
||||||||||||||||||||||||
Sbjct: 60 actccctccgtcccataatataag 37
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 71 cttatattacgggacggagggagt 94
||||||||| ||||||||||||||
Sbjct: 37 cttatattatgggacggagggagt 60
