miRNEST 2.0, an integrative microRNA resource :: BLAST
>45621_miR1127:micropc
Length = 110
Score = 135 bits (68), Expect = 9e-33
Identities = 100/108 (92%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 12 tccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaacta 71
||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||
Sbjct: 110 tccctccgttcggaattacttgtcacaaaaatg-ataaaaatggatgt-atctacaacta 53
Query: 72 aaccacatctagatacattcatttcttggacgagtaattccgaacgga 119
|| ||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 52 aaatgcatttagatacatttatttcttggacgagtaattccgaacgga 5
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 104 agtaattccgaacggaggga 123
||||||||||||||||||||
Sbjct: 91 agtaattccgaacggaggga 110
>45304_miR1128:micropc
Length = 108
Score = 91.7 bits (46), Expect = 1e-19
Identities = 71/78 (91%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 49 aaaatggatgttatctacaactaaaccacatctagatacattcatttcttggacgagtaa 108
||||||||||| ||||| ||||||| |||||||||||||||||||||| ||| |||||
Sbjct: 32 aaaatggatgt-atctagaactaaaatacatctagatacattcatttctacgacaagtaa 90
Query: 109 ttccgaacggagggagta 126
||||||||||||||||||
Sbjct: 91 ttccgaacggagggagta 108
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatg 44
||||||||||||||||||||||||||| || |||||
Sbjct: 108 tactccctccgttcggaattacttgtcgtagaaatg 73
Score = 40.1 bits (20), Expect = 4e-04
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 79 tctagatacattcatttcttggacgagtaattccgaacggagggagta 126
||||||||||| ||||| ||| ||||||| |||||||||||||||
Sbjct: 49 tctagatacatccattttcgagacaagtaatttcgaacggagggagta 2
>45649_miR1135:micropc
Length = 95
Score = 60.0 bits (30), Expect = 4e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 50 aaatggatgttatctacaactaaaccacatctagatacattcatttcttggacgagtaat 109
|||||||||| ||||| ||||||| |||||||||||||| ||||||| ||| ||||||
Sbjct: 27 aaatggatgt-atctagaactaaaatacatctagatacatccatttctgcgacaagtaat 85
Query: 110 tccgaacgga 119
| ||||||||
Sbjct: 86 ttcgaacgga 95
>45233_miR1128:micropc
Length = 133
Score = 60.0 bits (30), Expect = 4e-10
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 8 gtactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctaca 67
||||||||||||| || || |||||||||| ||||||||||||| |||| ||| || |
Sbjct: 131 gtactccctccgtccgaaaatacttgtcatcaaaatggataaaagaagatg-tatttaga 73
Query: 68 actaaaccacatctagatacat 89
|||||| ||||||||||||||
Sbjct: 72 actaaaatacatctagatacat 51
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaa 51
|||||||||||| ||||| || ||||||| |||||||||||||
Sbjct: 4 tactccctccgtccggaaatagttgtcatcaaaatggataaaa 46
>45051_miR1135:micropc
Length = 93
Score = 60.0 bits (30), Expect = 4e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 50 aaatggatgttatctacaactaaaccacatctagatacattcatttcttggacgagtaat 109
|||||||||| ||||| ||||||| |||||||||||||| ||||| | ||||||||||
Sbjct: 25 aaatggatgt-atctagaactaaaatacatctagatacatccatttttgcgacgagtaat 83
Query: 110 tccgaacgga 119
|| |||||||
Sbjct: 84 tcggaacgga 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 79 tctagatacattcatttcttggacgagtaatt 110
||||||||||| ||||||| |||||||||||
Sbjct: 41 tctagatacatccatttctgagacgagtaatt 10
>46650_miR1128:micropc
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || |||||||| | ||||||||||||||| ||| |||||| ||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggataaaaatgaatg-tatctagaa 59
Query: 69 ctaaaccacatctagatacat 89
| ||| ||||||||||||||
Sbjct: 60 ccaaaatacatctagatacat 80
>46443_miR1128:micropc
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || |||||||| | ||||||||||||||| ||| |||||| ||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggataaaaatgaatg-tatctagaa 59
Query: 69 ctaaaccacatctagatacat 89
| ||| ||||||||||||||
Sbjct: 60 ccaaaatacatctagatacat 80
>46231_miR1128:micropc
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || |||||||| | ||||||||||||||| ||| |||||| ||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggataaaaatgaatg-tatctagaa 59
Query: 69 ctaaaccacatctagatacat 89
| ||| ||||||||||||||
Sbjct: 60 ccaaaatacatctagatacat 80
>46218_miR1128:micropc
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || |||||||| | ||||||||||||||| ||| |||||| ||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggataaaaatgaatg-tatctagaa 59
Query: 69 ctaaaccacatctagatacat 89
| ||| ||||||||||||||
Sbjct: 60 ccaaaatacatctagatacat 80
>46180_miR1128:micropc
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || |||||||| | ||||||||||||||| ||| |||||| ||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggataaaaatgaatg-tatctagaa 59
Query: 69 ctaaaccacatctagatacat 89
| ||| ||||||||||||||
Sbjct: 60 ccaaaatacatctagatacat 80
>46136_miR1128:micropc
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || |||||||| | ||||||||||||||| ||| |||||| ||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggataaaaatgaatg-tatctagaa 59
Query: 69 ctaaaccacatctagatacat 89
| ||| ||||||||||||||
Sbjct: 60 ccaaaatacatctagatacat 80
>46044_miR1128:micropc
Length = 128
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || || ||||||| ||||| |||||||| |||| |||||| ||
Sbjct: 2 tactccctccgtccgaaaatatttgtcatcaaaatcgataaaaagagatg-tatctagaa 60
Query: 69 ctaaaccacatctagatacat 89
||||| ||||||||||||||
Sbjct: 61 ctaaaatacatctagatacat 81
Score = 54.0 bits (27), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgt 59
|||||||||||| ||||| |||||||||| ||| | |||||||| ||||||
Sbjct: 128 tactccctccgtccggaaatacttgtcatcaaactagataaaaaaggatgt 78
>45836_miR1128:micropc
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || |||||||| | ||||||||||||||| ||| |||||| ||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggataaaaatgaatg-tatctagaa 59
Query: 69 ctaaaccacatctagatacat 89
| ||| ||||||||||||||
Sbjct: 60 ccaaaatacatctagatacat 80
>45824_miR1128:micropc
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || |||||||| | ||||||||||||||| ||| |||||| ||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggataaaaatgaatg-tatctagaa 59
Query: 69 ctaaaccacatctagatacat 89
| ||| ||||||||||||||
Sbjct: 60 ccaaaatacatctagatacat 80
>45818_miR1128:micropc
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || |||||||| | ||||||||||||||| ||| |||||| ||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggataaaaatgaatg-tatctagaa 59
Query: 69 ctaaaccacatctagatacat 89
| ||| ||||||||||||||
Sbjct: 60 ccaaaatacatctagatacat 80
>45729_miR1128:micropc
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || |||||||| | ||||||||||||||| ||| |||||| ||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggataaaaatgaatg-tatctagaa 59
Query: 69 ctaaaccacatctagatacat 89
| ||| ||||||||||||||
Sbjct: 60 ccaaaatacatctagatacat 80
>45575_miR1128:micropc
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || |||||||| | ||||||||||||||| ||| |||||| ||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggataaaaatgaatg-tatctagaa 59
Query: 69 ctaaaccacatctagatacat 89
| ||| ||||||||||||||
Sbjct: 60 ccaaaatacatctagatacat 80
>45466_miR1128:micropc
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || |||||||| | ||||||||||||||| ||| |||||| ||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggataaaaatgaatg-tatctagaa 59
Query: 69 ctaaaccacatctagatacat 89
| ||| ||||||||||||||
Sbjct: 60 ccaaaatacatctagatacat 80
>45461_miR1128:micropc
Length = 128
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || || ||||||| ||||| |||||||| |||| |||||| ||
Sbjct: 2 tactccctccgtccgaaaatatttgtcatcaaaatcgataaaaagagatg-tatctagaa 60
Query: 69 ctaaaccacatctagatacat 89
||||| ||||||||||||||
Sbjct: 61 ctaaaatacatctagatacat 81
Score = 54.0 bits (27), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgt 59
|||||||||||| ||||| |||||||||| ||| | |||||||| ||||||
Sbjct: 128 tactccctccgtccggaaatacttgtcatcaaactagataaaaaaggatgt 78
>45150_miR1128:micropc
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || |||||||| | ||||||||||||||| ||| |||||| ||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggataaaaatgaatg-tatctagaa 59
Query: 69 ctaaaccacatctagatacat 89
| ||| ||||||||||||||
Sbjct: 60 ccaaaatacatctagatacat 80
>45094_miR1128:micropc
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || |||||||| | ||||||||||||||| ||| |||||| ||
Sbjct: 1 tactccctccgtccgaaaatacttgtcgaagaaatggataaaaatgaatg-tatctagaa 59
Query: 69 ctaaaccacatctagatacat 89
| ||| ||||||||||||||
Sbjct: 60 ccaaaatacatctagatacat 80
>44841_miR1128:micropc
Length = 128
Score = 58.0 bits (29), Expect = 2e-09
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgttatctacaa 68
|||||||||||| || || || ||||||| ||||| |||||||| |||| |||||| ||
Sbjct: 2 tactccctccgtccgaaaatatttgtcatcaaaatcgataaaaagagatg-tatctagaa 60
Query: 69 ctaaaccacatctagatacat 89
||||| ||||||||||||||
Sbjct: 61 ctaaaatacatctagatacat 81
Score = 54.0 bits (27), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgt 59
|||||||||||| ||||| |||||||||| ||| | |||||||| ||||||
Sbjct: 128 tactccctccgtccggaaatacttgtcatcaaactagataaaaaaggatgt 78
>45292_miR1439:micropc
Length = 112
Score = 56.0 bits (28), Expect = 7e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 81 tagatacattcatttcttggacgagtaattccgaacggagggagtatt 128
||||||||| ||||||| ||||||||||| ||||||||||||||||
Sbjct: 65 tagatacatccatttctgcgacgagtaatttggaacggagggagtatt 112
>45634_miR1133:micropc
Length = 120
Score = 54.0 bits (27), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgt 59
||||||||| || ||||| |||||||||| |||| |||| |||||||||||
Sbjct: 119 tactccctcggtccggaaatacttgtcatcaaaagggatgaaaatggatgt 69
>45127_miR1133:micropc
Length = 120
Score = 54.0 bits (27), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgt 59
||||||||| || ||||| |||||||||| |||| |||| |||||||||||
Sbjct: 119 tactccctcggtccggaaatacttgtcatcaaaagggatgaaaatggatgt 69
>45057_miR1133:micropc
Length = 120
Score = 54.0 bits (27), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcataaaaatggataaaaatggatgt 59
||||||||| || ||||| |||||||||| |||| |||| |||||||||||
Sbjct: 119 tactccctcggtccggaaatacttgtcatcaaaagggatgaaaatggatgt 69
>45155_miR1135:micropc
Length = 93
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 79 tctagatacattcatttcttggacgagtaattccgaacgga 119
||||||||||||||||| | ||| ||||||||||||||||
Sbjct: 53 tctagatacattcatttttgcgacaagtaattccgaacgga 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcataaaaatg 44
|||||||||||||||||||| |||||||
Sbjct: 93 tccgttcggaattacttgtcgcaaaaatg 65
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 16 tccgttcggaattacttgtc 35
||||||||||||||||||||
Sbjct: 1 tccgttcggaattacttgtc 20
>45387_miR1439:micropc
Length = 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 gtactccctccgttcggaattacttgtc 35
||||||||||||||| ||||||||||||
Sbjct: 1 gtactccctccgttccgaattacttgtc 28
Score = 42.1 bits (21), Expect = 1e-04
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 62 tctacaactaaaccacatctagatacattcatttcttggacgagtaattccgaacggagg 121
|||| ||||||| |||||||||||||| ||| | ||| |||||||| |||||||||
Sbjct: 66 tctaaaactaaaatacatctagatacatccatacgtgcgacaagtaattcggaacggagg 7
Query: 122 gagta 126
|||||
Sbjct: 6 gagta 2
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 100 gacgagtaattccgaacggagggagtat 127
||||||||||| |||||||||||||||
Sbjct: 82 gacgagtaatttggaacggagggagtat 109
>45643_miR1136:micropc
Length = 63
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 60 tatctacaactaaaccacatctagatacattcatttct 97
|||||| ||||||| |||||||||||||| |||||||
Sbjct: 45 tatctagaactaaaatacatctagatacatccatttct 8
>46822_miR1135:micropc
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 79 tctagatacattcatttcttggacgagtaattccgaacgga 119
||||||||||| |||||| ||| ||||||||||||||||
Sbjct: 53 tctagatacatctatttctgcgacaagtaattccgaacgga 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtc 35
||||||||||||||||||||
Sbjct: 93 tccgttcggaattacttgtc 74
>46065_miR1135:micropc
Length = 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 58/69 (84%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 49 aaaatggatgttatctacaactaaaccacatctagatacattcatttcttggacgagtaa 108
||||||||||| ||||| || |||| || ||||||||||| ||||| | ||| |||||
Sbjct: 22 aaaatggatgt-atctagaattaaaatacgtctagatacatccatttatgcgacaagtaa 80
Query: 109 ttccgaacg 117
|||||||||
Sbjct: 81 ttccgaacg 89
>45199_miR1135:micropc
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 79 tctagatacattcatttcttggacgagtaattccgaacgga 119
||||||||||| |||||| ||| ||||||||||||||||
Sbjct: 53 tctagatacatctatttctgcgacaagtaattccgaacgga 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtc 35
||||||||||||||||||||
Sbjct: 93 tccgttcggaattacttgtc 74
>45512_miR1136:micropc
Length = 63
Score = 40.1 bits (20), Expect = 4e-04
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 50 aaatggatgttatctacaactaaaccacatctagatacat 89
|||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 54 aaatggatgt-atctagaactaaaatacatctagatacat 16
