miRNEST 2.0, an integrative microRNA resource :: BLAST
>45304_miR1128:micropc
Length = 108
Score = 103 bits (52), Expect = 3e-23
Identities = 95/107 (88%), Gaps = 2/107 (1%)
Strand = Plus / Plus
Query: 8 ctactccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaatatg 67
|||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 1 ctactccctccgttcgaaattacttgtctcgaaaatggatgtatctagaactaaaataca 60
Query: 68 tttaagatacatccaattctacgacaaggaattcccgaacggnggga 114
| | |||||||| || |||||||||||| |||| |||||||| ||||
Sbjct: 61 tct-agatacattcatttctacgacaagtaatt-ccgaacggaggga 105
Score = 56.0 bits (28), Expect = 6e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctaga 56
||||||||||||||||||||||||||| || ||| |||||||||||
Sbjct: 108 tactccctccgttcggaattacttgtcgtagaaatgaatgtatctaga 61
>46822_miR1135:micropc
Length = 93
Score = 97.6 bits (49), Expect = 2e-21
Identities = 77/85 (90%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 18 cgttcggaattacttgtctcggatatggatgtatctagaactaaaatatgtttaagatac 77
||||||||||||||||||||||| |||||||||||||||| |||||||||| | ||||||
Sbjct: 3 cgttcggaattacttgtctcggaaatggatgtatctagaattaaaatatgtct-agatac 61
Query: 78 atccaattctacgacaaggaattcc 102
||| | |||| ||||||| ||||||
Sbjct: 62 atctatttctgcgacaagtaattcc 86
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtctcggatatggatgtatctaga 56
|||||||||||||||||||| | || || ||||||||||||
Sbjct: 93 tccgttcggaattacttgtcgcagaaatagatgtatctaga 53
>45199_miR1135:micropc
Length = 93
Score = 97.6 bits (49), Expect = 2e-21
Identities = 77/85 (90%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 18 cgttcggaattacttgtctcggatatggatgtatctagaactaaaatatgtttaagatac 77
||||||||||||||||||||||| |||||||||||||||| |||||||||| | ||||||
Sbjct: 3 cgttcggaattacttgtctcggaaatggatgtatctagaattaaaatatgtct-agatac 61
Query: 78 atccaattctacgacaaggaattcc 102
||| | |||| ||||||| ||||||
Sbjct: 62 atctatttctgcgacaagtaattcc 86
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtctcggatatggatgtatctaga 56
|||||||||||||||||||| | || || ||||||||||||
Sbjct: 93 tccgttcggaattacttgtcgcagaaatagatgtatctaga 53
>45649_miR1135:micropc
Length = 95
Score = 77.8 bits (39), Expect = 2e-15
Identities = 74/83 (89%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 19 gttcggaattacttg-tctcggatatggatgtatctagaactaaaatatgtttaagatac 77
||||||||||||||| ||||||| |||||||||||||||||||||||| | | ||||||
Sbjct: 5 gttcggaattacttggtctcggaaatggatgtatctagaactaaaatacatct-agatac 63
Query: 78 atccaattctacgacaaggaatt 100
||||| |||| ||||||| ||||
Sbjct: 64 atccatttctgcgacaagtaatt 86
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtctcggatatggatgtatctaga 56
|||||||| ||||||||||| | || |||||||||||||||
Sbjct: 95 tccgttcgaaattacttgtcgcagaaatggatgtatctaga 55
>45155_miR1135:micropc
Length = 93
Score = 71.9 bits (36), Expect = 1e-13
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 16 tccgttcggaattacttgtctcggatatggatgtatctagaactaaaa 63
||||||||||||||||||||||| | |||||||||||||||| |||||
Sbjct: 1 tccgttcggaattacttgtctcgaaaatggatgtatctagaattaaaa 48
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtctcggatatggatgtatctaga 56
|||||||||||||||||||| | | ||| |||||||||||
Sbjct: 93 tccgttcggaattacttgtcgcaaaaatgaatgtatctaga 53
>46065_miR1135:micropc
Length = 89
Score = 65.9 bits (33), Expect = 7e-12
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 18 cgttcggaattacttgtctcggatatggatgtatctagaactaaaatatgtttaagatac 77
|||||||||||| |||| ||| | |||||||||||||||| ||||||| || | ||||||
Sbjct: 1 cgttcggaattatttgtatcgaaaatggatgtatctagaattaaaatacgtct-agatac 59
Query: 78 atccaattctacgacaaggaattcc 102
||||| || | ||||||| ||||||
Sbjct: 60 atccatttatgcgacaagtaattcc 84
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 18 cgttcggaattacttgtctcggatatggatgtatctaga 56
|||||||||||||||||| | | |||||||||||||||
Sbjct: 89 cgttcggaattacttgtcgcataaatggatgtatctaga 51
>45643_miR1136:micropc
Length = 63
Score = 63.9 bits (32), Expect = 3e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 31 ttgtctcggatatggatgtatctagaactaaaatatgtttaagatacatccaattctacg 90
|||||||||||||| |||||||||||||||||||| | | ||||||||||| |||| ||
Sbjct: 63 ttgtctcggatatgaatgtatctagaactaaaatacatct-agatacatccatttctgcg 5
Query: 91 acaa 94
||||
Sbjct: 4 acaa 1
>46174_miR1135:micropc
Length = 93
Score = 60.0 bits (30), Expect = 4e-10
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 16 tccgttcggaattacttgtctcggatatggatgtatctagaactaaaata 65
|||||| |||||||| ||||||||| ||||| |||| |||||||||||||
Sbjct: 1 tccgtttggaattacctgtctcggaaatggacgtatttagaactaaaata 50
>45051_miR1135:micropc
Length = 93
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 25 aattacttgtctcggatatggatgtatctagaactaaaata 65
||||||| ||||| || ||||||||||||||||||||||||
Sbjct: 10 aattactcgtctcagaaatggatgtatctagaactaaaata 50
>45387_miR1439:micropc
Length = 109
Score = 56.0 bits (28), Expect = 6e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctaga 56
|||||||||||||| |||||||||||| | ||||||||||||||||
Sbjct: 2 tactccctccgttccgaattacttgtcgcacgtatggatgtatctaga 49
Score = 42.1 bits (21), Expect = 1e-04
Identities = 48/57 (84%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctagaactaaaata 65
|||||||||||||| ||||||| ||| || |||||||| |||| ||||||||||
Sbjct: 108 tactccctccgttccaaattactcgtcgttgaaatggatgtgtctaaaactaaaata 52
>46513_miR1136:micropc
Length = 63
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 42 atggatgtatctagaactaaaata 65
||||||||||||||||||||||||
Sbjct: 52 atggatgtatctagaactaaaata 29
>46322_miR1135:micropc
Length = 93
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaata 65
||||||||||||||||||||||||
Sbjct: 27 atggatgtatctagaactaaaata 50
>45621_miR1127:micropc
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 tccctccgttcggaattacttgtc 35
||||||||||||||||||||||||
Sbjct: 110 tccctccgttcggaattacttgtc 87
>45512_miR1136:micropc
Length = 63
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 42 atggatgtatctagaactaaaata 65
||||||||||||||||||||||||
Sbjct: 52 atggatgtatctagaactaaaata 29
>45292_miR1439:micropc
Length = 112
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatctaga 56
||||||||| ||| |||||||||||| | | ||||||||||||||||
Sbjct: 2 tactccctctattccgaattacttgtcgcaggtatggatgtatctaga 49
Score = 44.1 bits (22), Expect = 2e-05
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtctcggatatggatgtatcta 54
|||||||||||||| ||||||| ||| | || |||||||||||||
Sbjct: 110 tactccctccgttccaaattactcgtcgcagaaatggatgtatcta 65
>46044_miR1128:micropc
Length = 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 45 gatgtatctagaactaaaata 65
|||||||||||||||||||||
Sbjct: 48 gatgtatctagaactaaaata 68
>45862_miR1135:micropc
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtctcggatatggatgtatctaga 56
||||||| |||||||||||| | ||||||||||||||||
Sbjct: 93 tccgttccgaattacttgtcgcacgtatggatgtatctaga 53
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaata 65
|||||||||||||||| |||||||
Sbjct: 27 atggatgtatctagaattaaaata 50
>45703_miR1135:micropc
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtctcggatatggatgtatctaga 56
||||||| |||||||||||| | ||||||||||||||||
Sbjct: 93 tccgttccgaattacttgtcgcacgtatggatgtatctaga 53
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaata 65
|||||||||||||||| |||||||
Sbjct: 27 atggatgtatctagaattaaaata 50
>45493_miR1135:micropc
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtctcggatatggatgtatctaga 56
||||||| |||||||||||| | ||||||||||||||||
Sbjct: 93 tccgttccgaattacttgtcgcacgtatggatgtatctaga 53
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 42 atggatgtatctagaactaaaata 65
|||||||||||||||| |||||||
Sbjct: 27 atggatgtatctagaattaaaata 50
>45461_miR1128:micropc
Length = 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 45 gatgtatctagaactaaaata 65
|||||||||||||||||||||
Sbjct: 48 gatgtatctagaactaaaata 68
>44841_miR1128:micropc
Length = 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 45 gatgtatctagaactaaaata 65
|||||||||||||||||||||
Sbjct: 48 gatgtatctagaactaaaata 68
>45250_miR1136:micropc
Length = 63
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 42 atggatgtatctagaactaaaata 65
|||||||||||||||| |||||||
Sbjct: 52 atggatgtatctagaattaaaata 29
>45244_miR1136:micropc
Length = 63
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 42 atggatgtatctagaactaaaata 65
||||||||||| ||||||||||||
Sbjct: 52 atggatgtatccagaactaaaata 29
